RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 GPR32P1Q8NGA4 272 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 OR4K17Q8NGC6 315 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 OR4D11Q8NGI4 311 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 OR10Q1Q8NGQ4 319 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 B4GALNT2Q8NHY0 566 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 BBS10Q8TAM1 723 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 GPR119Q8TDV5 335 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 RELTQ969Z4 430 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 REXO5Q96IC2 774 aaKnown RBP8.87□□□□□ -0.99
CLK3-208ENST00000562626 ECSITQ9BQ95 431 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 PRR14Q9BWN1 585 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 MTHFD2LQ9H903 347 aaPredicted RBP8.87□□□□□ -0.99
CLK3-208ENST00000562626 AGPAT4Q9NRZ5 378 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 TMEM181Q9P2C4 612 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 SUCOQ9UBS9 1254 aaKnown RBP8.87□□□□□ -0.99
CLK3-208ENST00000562626 DKKL1Q9UK85 242 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 VDAC3Q9Y277 283 aa8.87□□□□□ -0.99
CLK3-208ENST00000562626 TRGV5A0A0B4J1U4 118 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 A0A1B0GVC2 190 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 CDHR4A6H8M9 788 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 ANKUB1A6NFN9 424 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 B2RBV5 119 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 C5orf58C9J3I9 102 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 NPIPA2E9PIF3 369 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 NPIPA3F8WFD2 350 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 H0YC42 278 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 TPST2O60704 377 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 DNAJA2O60884 412 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 MFN2O95140 757 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 DBIP07108 87 aaKnown RBP8.86□□□□□ -0.99
CLK3-208ENST00000562626 ESRRAP11474 423 aaPredicted RBP8.86□□□□□ -0.99
CLK3-208ENST00000562626 ETS2P15036 469 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 HPGDP15428 266 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 NCK1P16333 377 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 IL7RP16871 459 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 BMP7P18075 431 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 HK1P19367 917 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 SHC1P29353 583 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 SRD5A2P31213 254 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 ACAA2P42765 397 aaKnown RBP8.86□□□□□ -0.99
CLK3-208ENST00000562626 CLK3P49761 638 aaKnown RBP8.86□□□□□ -0.99
CLK3-208ENST00000562626 P2RX1P51575 399 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 CCR4P51679 360 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 TPD52P55327 224 aaPredicted RBP8.86□□□□□ -0.99
CLK3-208ENST00000562626 GFRA1P56159 465 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 CLDN15P56746 228 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 FOXF1Q12946 379 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 CEACAM7Q14002 265 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 DUSP7Q16829 419 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 PRAMEF8Q5VWM4 474 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 PRAMEF7Q5VXH5 474 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 C3P1Q6ZMU1 363 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 MTERF4Q7Z6M4 381 aaKnown RBP8.86□□□□□ -0.99
CLK3-208ENST00000562626 TSPYL5Q86VY4 417 aaPredicted RBP8.86□□□□□ -0.99
CLK3-208ENST00000562626 DEFB107AQ8IZN7 70 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 PGAM4Q8N0Y7 254 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 TMCO5AQ8N6Q1 288 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 SMYD1Q8NB12 490 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 ZNF527Q8NB42 609 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 OR2T12Q8NG77 320 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 NEIL3Q8TAT5 605 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 SLC7A6OSQ96CW6 309 aaPredicted RBP8.86□□□□□ -0.99
CLK3-208ENST00000562626 HOPXQ9BPY8 73 aaPredicted RBP8.86□□□□□ -0.99
CLK3-208ENST00000562626 UGT2B28Q9BY64 529 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 LAT2Q9GZY6 243 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 ACKR4Q9NPB9 350 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 SDHAF3Q9NRP4 125 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.86□□□□□ -0.99
CLK3-208ENST00000562626 PNPLA3Q9NST1 481 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 MED17Q9NVC6 651 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 THUMPD1Q9NXG2 353 aaKnown RBP8.86□□□□□ -0.99
CLK3-208ENST00000562626 QPCTLQ9NXS2 382 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 TAS2R10Q9NYW0 307 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 CALML5Q9NZT1 146 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 B4GALT7Q9UBV7 327 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 ZNF835Q9Y2P0 537 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 TEX15Q9BXT5 2789 aa8.86□□□□□ -0.99
CLK3-208ENST00000562626 OR2M5A3KFT3 312 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 M0QX08 132 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 GTPBP1O00178 669 aaKnown RBP8.85□□□□□ -0.99
CLK3-208ENST00000562626 AQP7O14520 342 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 EIF4E2O60573 245 aaKnown RBP8.85□□□□□ -0.99
CLK3-208ENST00000562626 NTN1O95631 604 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 OPN1LWP04000 364 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 THBS1P07996 1170 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 RNF224P0DH78 156 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 PRKCAP17252 672 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 TNFRSF1BP20333 461 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 HTR2AP28223 471 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 RYKP34925 604 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 LHX2P50458 406 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 ZNF136P52737 540 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 SUCLG1P53597 346 aaKnown RBP8.85□□□□□ -0.99
CLK3-208ENST00000562626 DSCR4P56555 118 aaPredicted RBP8.85□□□□□ -0.99
CLK3-208ENST00000562626 CLDN18P56856 261 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 EEFSECP57772 596 aaKnown RBP8.85□□□□□ -0.99
CLK3-208ENST00000562626 RBBP4Q09028 425 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 QPRTQ15274 297 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 NPTX1Q15818 432 aa8.85□□□□□ -0.99
CLK3-208ENST00000562626 KRTCAP3Q53RY4 240 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms