RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SLC30A8Q8IWU4 369 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 GATSQ8NAP1 163 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 C11orf65Q8NCR3 313 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 HIPK4Q8NE63 616 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 NFKBIDQ8NI38 313 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 PHOSPHO1Q8TCT1 267 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 PHF10Q8WUB8 498 aaKnown RBP12.15□□□□□ -0.46
CDH1-204ENST00000562118 WDR60Q8WVS4 1066 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 REXO5Q96IC2 774 aaKnown RBP12.15□□□□□ -0.46
CDH1-204ENST00000562118 TIMP4Q99727 224 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 NPAS1Q99742 590 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 EFCAB1Q9HAE3 211 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 CARD8Q9Y2G2 431 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 IFT52Q9Y366 437 aa12.15□□□□□ -0.46
CDH1-204ENST00000562118 OR2M5A3KFT3 312 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 TMEM247A6NEH6 219 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 CLDN24A6NM45 220 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 FAM220BPB1ANY3 271 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 HCRTR2O43614 444 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 TRAPPC6AO75865 159 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 PDE9AO76083 593 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 EPPINO95925 133 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 CSTAP01040 98 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 PRKCAP17252 672 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 ELK4P28324 431 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 SCARB2Q14108 478 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 VEZF1Q14119 521 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 ELOAQ14241 798 aaKnown RBP12.14□□□□□ -0.47
CDH1-204ENST00000562118 VMACQ2NL98 169 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 EIF2S3LQ2VIR3 472 aaKnown RBP12.14□□□□□ -0.47
CDH1-204ENST00000562118 NDUFAF6Q330K2 333 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 MRPL2Q5T653 305 aaKnown RBP12.14□□□□□ -0.47
CDH1-204ENST00000562118 RTL6Q6ICC9 239 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 ZNF836Q6ZNA1 936 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 CD163Q86VB7 1156 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 SLC15A3Q8IY34 581 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 PEX5LQ8IYB4 626 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 CCDC197Q8NCU1 140 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 OR52P1PQ8NH57 321 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 OR10A6Q8NH74 314 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 ST8SIA1Q92185 356 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 WDYHV1Q96HA8 205 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 PIGQQ9BRB3 760 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 THUMPD3Q9BV44 507 aaKnown RBP12.14□□□□□ -0.47
CDH1-204ENST00000562118 CMTM6Q9NX76 183 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 DKKL1Q9UK85 242 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 OSGIN2Q9Y236 505 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 ZNF443Q9Y2A4 671 aaPredicted RBP12.14□□□□□ -0.47
CDH1-204ENST00000562118 FAM215AQ9Y5M1 114 aa12.14□□□□□ -0.47
CDH1-204ENST00000562118 USP9YO00507 2555 aaPredicted RBP12.14□□□□□ -0.47
CDH1-204ENST00000562118 DOCK7Q96N67 2140 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 A0A1B0GUH1 482 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 E9PLN8 166 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 PRRG2O14669 202 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 ZNHIT1O43257 154 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 WDR1O75083 606 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 MFN2O95140 757 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 HOXD4P09016 255 aaPredicted RBP12.13□□□□□ -0.47
CDH1-204ENST00000562118 ABOP16442 354 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 HK1P19367 917 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 PTGER4P35408 488 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 EIF1P41567 113 aaKnown RBP12.13□□□□□ -0.47
CDH1-204ENST00000562118 ACAA2P42765 397 aaKnown RBP12.13□□□□□ -0.47
CDH1-204ENST00000562118 CLDN15P56746 228 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 CBFBQ13951 182 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 TOMM34Q15785 309 aaPredicted RBP12.13□□□□□ -0.47
CDH1-204ENST00000562118 GXYLT1Q4G148 440 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 ERICH5Q6P6B1 374 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 AAGABQ6PD74 315 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 GGNQ86UU5 652 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 COMTD1Q86VU5 262 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 VRK2Q86Y07 508 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 PM20D2Q8IYS1 436 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 ULK2Q8IYT8 1036 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 MARVELD2Q8N4S9 558 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 OR14L1PQ8NHC6 308 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 ZPLD1Q8TCW7 415 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 CNOT9Q92600 299 aaKnown RBP12.13□□□□□ -0.47
CDH1-204ENST00000562118 ABTB1Q969K4 478 aaPredicted RBP12.13□□□□□ -0.47
CDH1-204ENST00000562118 SH3YL1Q96HL8 342 aaPredicted RBP12.13□□□□□ -0.47
CDH1-204ENST00000562118 ADGRG7Q96K78 797 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 MRGPRX4Q96LA9 322 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 VKORC1Q9BQB6 163 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 TP63Q9H3D4 680 aaPredicted RBP12.13□□□□□ -0.47
CDH1-204ENST00000562118 LDAHQ9H6V9 325 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 EVA1AQ9H8M9 152 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 PNPLA3Q9NST1 481 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 ARL8BQ9NVJ2 186 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 TMEM181Q9P2C4 612 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 TAGLN3Q9UI15 199 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 ERRFI1Q9UJM3 462 aaPredicted RBP12.13□□□□□ -0.47
CDH1-204ENST00000562118 TINAGQ9UJW2 476 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 SLC5A6Q9Y289 635 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 MEMO1Q9Y316 297 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 SLC6A5Q9Y345 797 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 AP4B1Q9Y6B7 739 aa12.13□□□□□ -0.47
CDH1-204ENST00000562118 ADGRG4Q8IZF6 3080 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 BAHCC1Q9P281 2608 aa12.12□□□□□ -0.47
CDH1-204ENST00000562118 AHRRA9YTQ3 701 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms