RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ADH5P11766 374 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 PRG2P13727 222 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 PYCR1P32322 319 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 OR12D2P58182 307 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 VSX2P58304 361 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 SNTB2Q13425 540 aaKnown RBP12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 CAMK2DQ13557 499 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 SUZ12Q15022 739 aaKnown RBP12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 FRRS1Q6ZNA5 592 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 ERN2Q76MJ5 926 aaKnown RBP12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 SYT9Q86SS6 491 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 CDH24Q86UP0 819 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 FBXL6Q8N531 539 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 TMIEQ8NEW7 156 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 PFN4Q8NHR9 129 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 BRIX1Q8TDN6 353 aaKnown RBP12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 LRRN3Q9H3W5 708 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 FN3KQ9H479 309 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 ERVMER34-1Q9H9K5 563 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 MEIKINA0A087WXM9 373 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 SLC22A31A6NKX4 558 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 PRRT4C9JH25 899 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 POLR2CP19387 275 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 CDK3Q00526 305 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 GPR68Q15743 365 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 GRK1Q15835 563 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 CCNJQ5T5M9 372 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 GPR139Q6DWJ6 353 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 ZNF836Q6ZNA1 936 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 OR2L5Q8NG80 312 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 OR4D9Q8NGE8 314 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 OR2T35Q8NGX2 323 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 POF1BQ8WVV4 589 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 COX14Q96I36 57 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 INSM2Q96T92 566 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 TEAD3Q99594 435 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 CES1P1Q9UKY3 287 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 AUP1Q9Y679 476 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 DUXAA6NLW8 204 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 MPC2O95563 127 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 MAKP20794 623 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 MMP15P51511 669 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 TAS2R43P59537 309 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 RPL6Q02878 288 aaKnown RBP12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 ZIC1Q15915 447 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 MRM1Q6IN84 353 aaKnown RBP12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 PRSS45Q7RTY3 260 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 RANBP3LQ86VV4 465 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 CACUL1Q86Y37 369 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 IZUMO1Q8IYV9 350 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 TOR1AIP2Q8NFQ8 470 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 WFIKKN2Q8TEU8 576 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 GHSRQ92847 366 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 PTP4A1Q93096 173 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 KISS1RQ969F8 398 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 TMEM168Q9H0V1 697 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 MTHFD2LQ9H903 347 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 DLL4Q9NR61 685 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 C20orf141Q9NUB4 165 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 SCP2D1Q9UJQ7 156 aa12.98□□□□□ -0.33
VPS9D1-202ENST00000561976 CDHR4A6H8M9 788 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 BHLHE40O14503 412 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 CLTBP09497 229 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 ANKRD34CP0C6C1 535 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 GKN3PP0CG01 181 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 SULT1A3P0DMM9 295 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 SULT1A4P0DMN0 295 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 SAGP10523 405 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 CLUP10909 449 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 CD53P19397 219 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 RAB28P51157 221 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 FXYD6P3P58550 94 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 POU6F2P78424 691 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 CRYZQ08257 329 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 HNRNPA1L2Q32P51 320 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 FAM111BQ6SJ93 734 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 RTL4Q6ZR62 310 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 BTN2A1Q7KYR7 527 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 SLC44A3Q8N4M1 653 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 CYB561A3Q8NBI2 242 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 HGDQ93099 445 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 OTUB2Q96DC9 234 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 INPP5EQ9NRR6 644 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 MRPL15Q9P015 296 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 ZMIZ1Q9ULJ6 1067 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 EDDM13A0A1B0GTR0 161 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 TRABD2BA6NFA1 517 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 ZNF593O00488 134 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 WNT1P04628 370 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 FOXK2Q01167 660 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 ELAVL3Q14576 367 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 MLF2Q15773 248 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 AANATQ16613 207 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 TMEM52BQ4KMG9 183 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 CLLU1Q5K131 121 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 PXDC1Q5TGL8 231 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 ADAMTSL4Q6UY14 1074 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 FGD2Q7Z6J4 655 aa12.97□□□□□ -0.33
VPS9D1-202ENST00000561976 OR5J2Q8NH18 312 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms