RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 HDHD5Q9BXW7 423 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 PLEKHF2Q9H8W4 249 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 PLSCR4Q9NRQ2 329 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 KLHL28Q9NXS3 571 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 GIMAP2Q9UG22 337 aa12.63□□□□□ -0.39
TPM1-223ENST00000560445 SPIN1Q9Y657 262 aaPredicted RBP12.63□□□□□ -0.39
TPM1-223ENST00000560445 PRRC2AP48634 2157 aaKnown RBP12.62□□□□□ -0.39
TPM1-223ENST00000560445 PRSS51A0A1B0GVH4 220 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 TRPC5OSA6NMA1 111 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 H0YC42 278 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 TNFSF11O14788 317 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 CXCL13O43927 109 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 AQP8O94778 261 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 CGAP01215 116 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 LINGO3P0C6S8 592 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 MATN1P21941 496 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 PSMA4P25789 261 aaKnown RBP12.62□□□□□ -0.39
TPM1-223ENST00000560445 KHKP50053 298 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 CCR4P51679 360 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 TPD52P55327 224 aaPredicted RBP12.62□□□□□ -0.39
TPM1-223ENST00000560445 ZNF117Q03924 483 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 STX3Q13277 289 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 CD226Q15762 336 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 BEX5Q5H9J7 111 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 C3orf33Q6P1S2 294 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 ZNF474Q6S9Z5 364 aaPredicted RBP12.62□□□□□ -0.39
TPM1-223ENST00000560445 PLXDC2Q6UX71 529 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 C6orf120Q7Z4R8 191 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 ZAR1Q86SH2 424 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 ZNF781Q8N8C0 355 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 STEAP2Q8NFT2 490 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 OR5W2Q8NH69 310 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 MIPOL1Q8TD10 442 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 ST8SIA1Q92185 356 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 OSTF1Q92882 214 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 ARSGQ96EG1 525 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 ADGRG7Q96K78 797 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 PKNOX2Q96KN3 472 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 ZBTB18Q99592 522 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 TMUB1Q9BVT8 246 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 KLHL4Q9C0H6 718 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 AKTIPQ9H8T0 292 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 NGBQ9NPG2 151 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 HAO1Q9UJM8 370 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 ICAM5Q9UMF0 924 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 SLC35A3Q9Y2D2 325 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 GPR52Q9Y2T5 361 aa12.62□□□□□ -0.39
TPM1-223ENST00000560445 SERINC4A6NH21 518 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 FAM171A2A8MVW0 826 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 SLCO1B7G3V0H7 640 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 ZNF195O14628 629 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 ANKRD28O15084 1053 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 DHRS4L1P0CG22 281 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 UQCRBP14927 111 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 PGCP20142 388 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 UQCRC2P22695 453 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 SFTPDP35247 375 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 CHI3L1P36222 383 aaPredicted RBP12.61□□□□□ -0.39
TPM1-223ENST00000560445 MAGEA8P43361 318 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 FOXF1Q12946 379 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 GNA13Q14344 377 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 POU4F3Q15319 338 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 ZNF239Q16600 458 aaKnown RBP12.61□□□□□ -0.39
TPM1-223ENST00000560445 EXOC3L2Q2M3D2 409 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 CTU2Q2VPK5 515 aaKnown RBP12.61□□□□□ -0.39
TPM1-223ENST00000560445 ARHGAP11BQ3KRB8 267 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 OGFOD2Q6N063 350 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 EIF3MQ7L2H7 374 aaKnown RBP12.61□□□□□ -0.39
TPM1-223ENST00000560445 SPATA19Q7Z5L4 167 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 LRRC75A-AS1Q8N1F1 130 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 ZNF610Q8N9Z0 462 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 OR5AK3PQ8NH89 298 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 RAB3IL1Q8TBN0 382 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 RNF128Q8TEB7 428 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 SLC25A43Q8WUT9 341 aaPredicted RBP12.61□□□□□ -0.39
TPM1-223ENST00000560445 ZHX1-C8orf76Q96EF9 292 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 OTUB1Q96FW1 271 aaPredicted RBP12.61□□□□□ -0.39
TPM1-223ENST00000560445 WFIKKN1Q96NZ8 548 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 SDF2Q99470 211 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 PAIP2Q9BPZ3 127 aaKnown RBP12.61□□□□□ -0.39
TPM1-223ENST00000560445 LIME1Q9H400 295 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 TMEM185BQ9H7F4 350 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 ZNF395Q9H8N7 513 aaPredicted RBP12.61□□□□□ -0.39
TPM1-223ENST00000560445 KLHL9Q9P2J3 617 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 PRDM4Q9UKN5 801 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 CARD8Q9Y2G2 431 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 AKAP9Q99996 3911 aa12.61□□□□□ -0.39
TPM1-223ENST00000560445 SETD2Q9BYW2 2564 aaPredicted RBP12.6□□□□□ -0.39
TPM1-223ENST00000560445 A0A0J9YW62 118 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 SHISA8B8ZZ34 492 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 E9PBE3 544 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 NPIPB9F8W1W9 429 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 SMPD2O60906 423 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 PRKD3O94806 890 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 CSTAP01040 98 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 PRKCAP17252 672 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 AGTR1P30556 359 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 ARRB2P32121 409 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 S100A3P33764 101 aa12.6□□□□□ -0.39
TPM1-223ENST00000560445 SLC6A8P48029 635 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms