RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 VSTM2LQ96N03 204 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 SLC38A2Q96QD8 506 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 PLGRKTQ9HBL7 147 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 Q9N2J8 555 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 DNAJC27Q9NZQ0 273 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 B3GALT1Q9Y5Z6 326 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 SNTNA6NMZ2 147 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 SCRG1O75711 98 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 NR4A1P22736 598 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 PSMD4P55036 377 aaKnown RBP16.42■□□□□ 0.22
SNX1-208ENST00000559844 GABREP78334 506 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 ERV3-1Q14264 604 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 OR1Q1Q15612 314 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 DCAF12Q5T6F0 453 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 MED25Q71SY5 747 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 TAAR9Q96RI9 348 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 ZNF559Q9BR84 538 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 NDC1Q9BTX1 674 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 G6PC3Q9BUM1 346 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 SLC7A5P2Q9GIP4 190 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 EGLN3Q9H6Z9 239 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 MMACHCQ9Y4U1 282 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 CLDN16Q9Y5I7 305 aa16.42■□□□□ 0.22
SNX1-208ENST00000559844 NPIPA5A0A0B4J1W7 369 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 NPIPA7E9PJI5 369 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 M0R082 166 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 M0R3G1 203 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 KLF4O43474 513 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 PRKYO43930 277 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 CLPXO76031 633 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 NPIPA8P0DM63 369 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 DRD5P21918 477 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 SSTR4P31391 388 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 FUT7Q11130 342 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 SNAPC1Q16533 368 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 MOGQ16653 247 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 ACSM5Q6NUN0 579 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 NRMQ8IXM6 262 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 CYP4Z2PQ8N1L4 340 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 METTL27Q8N6F8 245 aaPredicted RBP16.41■□□□□ 0.22
SNX1-208ENST00000559844 CLDN22Q8N7P3 220 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 TMEM163Q8TC26 289 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 TMEM255BQ8WV15 326 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 TMEM80Q96HE8 168 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 CNPPD1Q9BV87 410 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 RACGAP1Q9H0H5 632 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.41■□□□□ 0.22
SNX1-208ENST00000559844 CNIH4Q9P003 139 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 PRODH2Q9UF12 536 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 KLK13Q9UKR3 277 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 WDFY3Q8IZQ1 3526 aa16.41■□□□□ 0.22
SNX1-208ENST00000559844 IRGMA1A4Y4 181 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 TLX2O43763 284 aaPredicted RBP16.4■□□□□ 0.22
SNX1-208ENST00000559844 TNFSF15O95150 251 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 PTHP01270 115 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 IFNA16P05015 189 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 DBTP11182 482 aaKnown RBP16.4■□□□□ 0.22
SNX1-208ENST00000559844 MAOAP21397 527 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 EFNB1P98172 346 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 ZNF91Q05481 1191 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 TMEM164Q5U3C3 297 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 RNLSQ5VYX0 342 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 ZNF613Q6PF04 617 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 SLC46A3Q7Z3Q1 461 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 GRAMD2AQ8IUY3 354 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 CROCCP3Q8IVE0 287 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 OR7G1Q8NGA0 311 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 SLC35B4Q969S0 331 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 OR1F2PQ96R84 312 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 DDA1Q9BW61 102 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 TSSK6Q9BXA6 273 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 PLA2G12AQ9BZM1 189 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 TMEM27Q9HBJ8 222 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 DHCR7Q9UBM7 475 aaKnown RBP16.4■□□□□ 0.22
SNX1-208ENST00000559844 SDK2Q58EX2 2172 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 GKN3PP0CG01 181 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 PRG2P13727 222 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 HTR2AP28223 471 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 LIPAP38571 399 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 OCA2Q04671 838 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 TTLL10Q6ZVT0 673 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 PRSS27Q9BQR3 290 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 ULBP3Q9BZM4 244 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 OR10A5Q9H207 317 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 DSN1Q9H410 356 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 TBC1D23Q9NUY8 699 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 IL20Q9NYY1 176 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 SRPK3Q9UPE1 567 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 ERVK-19Q9WJR5 959 aa16.4■□□□□ 0.22
SNX1-208ENST00000559844 TMEM184BQ9Y519 407 aaPredicted RBP16.4■□□□□ 0.22
SNX1-208ENST00000559844 C9orf172C9J069 976 aa16.39■□□□□ 0.21
SNX1-208ENST00000559844 SPINK2P20155 84 aa16.39■□□□□ 0.21
SNX1-208ENST00000559844 ALAS2P22557 587 aa16.39■□□□□ 0.21
SNX1-208ENST00000559844 RFX3P48380 749 aa16.39■□□□□ 0.21
SNX1-208ENST00000559844 RHAGQ02094 409 aa16.39■□□□□ 0.21
SNX1-208ENST00000559844 ZNF141Q15928 474 aa16.39■□□□□ 0.21
SNX1-208ENST00000559844 DGUOKQ16854 277 aa16.39■□□□□ 0.21
SNX1-208ENST00000559844 TMEM44Q2T9K0 475 aa16.39■□□□□ 0.21
SNX1-208ENST00000559844 SYT14P1Q58G82 188 aa16.39■□□□□ 0.21
SNX1-208ENST00000559844 ARMCX4Q5H9R4 360 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms