RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 TMEM176BQ3YBM2 270 aaPredicted RBP18.29■□□□□ 0.52
TSPAN3-206ENST00000559373 KLHL26Q53HC5 615 aa18.29■□□□□ 0.52
TSPAN3-206ENST00000559373 YTHDF3Q7Z739 585 aaKnown RBP18.29■□□□□ 0.52
TSPAN3-206ENST00000559373 MISPQ8IVT2 679 aa18.29■□□□□ 0.52
TSPAN3-206ENST00000559373 TUSC5Q8IXB3 177 aa18.29■□□□□ 0.52
TSPAN3-206ENST00000559373 TMCO5AQ8N6Q1 288 aa18.29■□□□□ 0.52
TSPAN3-206ENST00000559373 PPP1R14CQ8TAE6 165 aa18.29■□□□□ 0.52
TSPAN3-206ENST00000559373 OR5P2Q8WZ92 322 aa18.29■□□□□ 0.52
TSPAN3-206ENST00000559373 PLPPR2Q96GM1 343 aa18.29■□□□□ 0.52
TSPAN3-206ENST00000559373 ACTR6Q9GZN1 396 aa18.29■□□□□ 0.52
TSPAN3-206ENST00000559373 CSPG4Q6UVK1 2322 aa18.28■□□□□ 0.52
TSPAN3-206ENST00000559373 ZNF195O14628 629 aa18.28■□□□□ 0.52
TSPAN3-206ENST00000559373 ITM2AO43736 263 aa18.28■□□□□ 0.52
TSPAN3-206ENST00000559373 G6PDP11413 515 aa18.28■□□□□ 0.52
TSPAN3-206ENST00000559373 HBA1P69905 142 aa18.28■□□□□ 0.52
TSPAN3-206ENST00000559373 ZNF239Q16600 458 aaKnown RBP18.28■□□□□ 0.52
TSPAN3-206ENST00000559373 CLECL1Q8IZS7 167 aa18.28■□□□□ 0.52
TSPAN3-206ENST00000559373 ZNF619Q8N2I2 560 aa18.28■□□□□ 0.52
TSPAN3-206ENST00000559373 LGALS13Q9UHV8 139 aa18.28■□□□□ 0.52
TSPAN3-206ENST00000559373 A0A1W2PNR3 127 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 C9JVG2 144 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 CYP7B1O75881 506 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 TUBBP07437 444 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 BPGMP07738 259 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 NUDT17P0C025 328 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 P2RX1P51575 399 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 CCR4P51679 360 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 ZNF844Q08AG5 666 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 PDCD2Q16342 344 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 PDSS1Q5T2R2 415 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 OR4F3Q6IEY1 312 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 BEND4Q6ZU67 534 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 RIBC1Q8N443 379 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 OR56A1Q8NGH5 318 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 RAB3IL1Q8TBN0 382 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 GPR119Q8TDV5 335 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 ZNF775Q96BV0 537 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 COQ8BQ96D53 544 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 DNAJA3Q96EY1 480 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 PIP5K1AQ99755 562 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 DUSP26Q9BV47 211 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 SERHL2Q9H4I8 314 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 PAQR5Q9NXK6 330 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 ICAM5Q9UMF0 924 aa18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 V9GYY5 206 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-206ENST00000559373 ALPK2Q86TB3 2170 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 CENPVL1A0A0U1RR11 272 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 ENPP1P22413 925 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 LCN1P31025 176 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 RPL3P39023 403 aaKnown RBP18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 ATP12AP54707 1039 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 GPR68Q15743 365 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 LSM12Q3MHD2 195 aaKnown RBP18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 BEX5Q5H9J7 111 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 PDZK1Q5T2W1 519 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 ZNF704Q6ZNC4 412 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 PLEKHM3Q6ZWE6 761 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 ATG4DQ86TL0 474 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 RIMKLAQ8IXN7 391 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 LRRC75A-AS1Q8N1F1 130 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 ZNF527Q8NB42 609 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 PSMA8Q8TAA3 256 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 S100PBPQ96BU1 408 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 REXO5Q96IC2 774 aaKnown RBP18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 COQ10BQ9H8M1 238 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 ATAD3AQ9NVI7 634 aa18.26■□□□□ 0.51
TSPAN3-206ENST00000559373 PRKCAP17252 672 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 DDX5P17844 614 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 PRPS1L1P21108 318 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 PTH2RP49190 550 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 TMEM201Q5SNT2 666 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 C20orf204Q6ZNR8 217 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 FCRLAQ7L513 359 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 MTERF4Q7Z6M4 381 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 HMGN2P46Q86SG4 172 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 STK32CQ86UX6 486 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 RNF128Q8TEB7 428 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 CAVIN3Q969G5 261 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 SDF2Q99470 211 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 PRPF18Q99633 342 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 QRSL1Q9H0R6 528 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 GLRX2Q9NS18 164 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 KCNE5Q9UJ90 142 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 MKLN1Q9UL63 735 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 DTNAQ9Y4J8 743 aa18.25■□□□□ 0.51
TSPAN3-206ENST00000559373 NPIPB9F8W1W9 429 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 H3BNH8 94 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 FCMRO60667 390 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 HSPA4LO95757 839 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 NID1P14543 1247 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 MATN1P21941 496 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 EIF1P41567 113 aaKnown RBP18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 NR1H2P55055 460 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 QPRTQ15274 297 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 GTF2IRD2BQ6EKJ0 949 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 C6orf120Q7Z4R8 191 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 GTF2IRD2Q86UP8 949 aa18.24■□□□□ 0.51
TSPAN3-206ENST00000559373 ANKRD46Q86W74 232 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms