RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 TMEM52Q8NDY8 209 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 OR4F6Q8NGB9 312 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 CNIH3Q8TBE1 160 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 NT5CQ8TCD5 201 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 UTP15Q8TED0 518 aaKnown RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 CREB3L4Q8TEY5 395 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 NEIL2Q969S2 332 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 C14orf79Q96F83 325 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 FCRL1Q96LA6 429 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 WDFY2Q96P53 400 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 OR52E6Q96RD3 313 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 LPAR4Q99677 370 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 COPS4Q9BT78 406 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 SLC6A16Q9GZN6 736 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 PCBD2Q9H0N5 130 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 RIBC2Q9H4K1 309 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 SLA2Q9H6Q3 261 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 RUBCNLQ9H714 662 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 NEK6Q9HC98 313 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 NPDC1Q9NQX5 325 aaPredicted RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 KRT84Q9NSB2 600 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 DEPPQ9NTK1 212 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 FAM120CQ9NX05 1096 aaKnown RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 SLC25A37Q9NYZ2 338 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 LRFN1Q9P244 771 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 SEC14L4Q9UDX3 406 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 PSORS1C1Q9UIG5 152 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 ANGPTL3Q9Y5C1 460 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 PCDHB14Q9Y5E9 798 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 LYVE1Q9Y5Y7 322 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 V9GYQ6 96 aa5.41□□□□□ -1.54
USP3-212ENST00000559276 SETD2Q9BYW2 2564 aaPredicted RBP5.41□□□□□ -1.54
USP3-212ENST00000559276 MED13LQ71F56 2210 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 EML6Q6ZMW3 1958 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 A0A1B0GTH9 108 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 A0A1B0GTL3 188 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 SLC35F4A4IF30 521 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 PINLYPA6NC86 204 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 EFCAB10A6NFE3 127 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 CLCA1A8K7I4 914 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 CENPXA8MT69 81 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 E9PLN8 166 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 MANBAO00462 879 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 OR7A17O14581 309 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 NDUFS4O43181 175 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 OR1F1O43749 312 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 XPNPEP2O43895 674 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 UGDHO60701 494 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 PRAMEF4O60810 478 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 WBP4O75554 376 aaKnown RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 CCNKO75909 580 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 FADS2O95864 444 aaKnown RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 SLC35G6P0C7Q6 338 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 PIPP12273 146 aaPredicted RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 ANXA8P13928 327 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 ITGA2P17301 1181 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 GPX2P18283 190 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 PRPS1L1P21108 318 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 ENDOUP21128 410 aaKnown RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 HSD3B2P26439 372 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 PPP2R1BP30154 601 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 SSTR2P30874 369 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 GGT2P36268 569 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 GGT5P36269 586 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 PIK3CBP42338 1070 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 SLC15A1P46059 708 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 CLK3P49761 638 aaKnown RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 CCR8P51685 355 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 SMSP52788 366 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 DGKQP52824 942 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 IST1P53990 364 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 RAB8AP61006 207 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 NCS1P62166 190 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 REEP5Q00765 189 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 OC90Q02509 493 aaPredicted RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 CHRNEQ04844 493 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 NPRL3Q12980 569 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 RUNX2Q13950 521 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 IRF3Q14653 427 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 TIGD6Q17RP2 521 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 VMACQ2NL98 169 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 ZFP69Q49AA0 526 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 RFTN2Q52LD8 501 aaPredicted RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 SPANXN4Q5MJ08 99 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 CCNJQ5T5M9 372 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 C10orf62Q5T681 223 aaPredicted RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 PRAMEF9Q5VWM5 478 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 RSBN1Q5VWQ0 802 aaPredicted RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 RNLSQ5VYX0 342 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 TIGD3Q6B0B8 471 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 SPNS3Q6ZMD2 512 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 C16orf47Q6ZP98 133 aaPredicted RBP5.4□□□□□ -1.54
USP3-212ENST00000559276 QSOX2Q6ZRP7 698 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 CBLL1Q75N03 491 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 NANOGNBQ7Z5D8 188 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 CCDC190Q86UF4 302 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 CYP4Z1Q86W10 505 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 CCDC103Q8IW40 242 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 SULF2Q8IWU5 870 aa5.4□□□□□ -1.54
USP3-212ENST00000559276 UBQLNLQ8IYU4 475 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms