RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 CBFBQ13951 182 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 CAPRIN1Q14444 709 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 SF3B4Q15427 424 aaKnown RBP eCLIP17.09■□□□□ 0.331e-7■■■■□ 25.6
RABGGTA-208ENST00000558954 RPS26P11Q5JNZ5 115 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 PIGWQ7Z7B1 504 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 HMGN2P46Q86SG4 172 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 ULK2Q8IYT8 1036 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 C10orf111Q8N326 155 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 POU5F2Q8N7G0 328 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 OR5W2Q8NH69 310 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 LRRC58Q96CX6 371 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 CCDC120Q96HB5 630 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 SH3GL1Q99961 368 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 SLC39A3Q9BRY0 314 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 TRIM8Q9BZR9 551 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 MYLK2Q9H1R3 596 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 TMEM38AQ9H6F2 299 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 BCL2L10Q9HD36 194 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 MED17Q9NVC6 651 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 GID8Q9NWU2 228 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 CAMK2AQ9UQM7 478 aa17.09■□□□□ 0.33
RABGGTA-208ENST00000558954 OR2M5A3KFT3 312 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 COX4I1P13073 169 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 CPN1P15169 458 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 POU3F2P20265 443 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 PGM1P36871 562 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 EIF1P41567 113 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 LHX2P50458 406 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 CDK6Q00534 326 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 LARS2Q15031 903 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 TMEM44Q2T9K0 475 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 LIN52Q52LA3 116 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 TMEM211Q6ICI0 200 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 REEP3Q6NUK4 255 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 RPTNQ6XPR3 784 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 B3GNT6Q6ZMB0 384 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 GTPBP8Q8N3Z3 284 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 OR8J3Q8NGG0 315 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 NFKBIDQ8NI38 313 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 RCN3Q96D15 328 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 ARSGQ96EG1 525 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 DMRTA2Q96SC8 542 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 EXOSC3Q9NQT5 275 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 ALKBH4Q9NXW9 302 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 STOML1Q9UBI4 398 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 ANGPT4Q9Y264 503 aa17.08■□□□□ 0.32
RABGGTA-208ENST00000558954 AHRRA9YTQ3 701 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 H0Y3Z8 333 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 H3BML4 177 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 ZG16O60844 167 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 DCTN3O75935 186 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 PGM3O95394 542 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 FAM107AO95990 144 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 THBS1P07996 1170 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 LINGO3P0C6S8 592 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 PEPDP12955 493 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 ETS2P15036 469 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 ZNF708P17019 499 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 SLC6A2P23975 617 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 SCARB2Q14108 478 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 SELPLGQ14242 412 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 C1orf185Q5T7R7 199 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 GKAP1Q5VSY0 366 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 NANOGP8Q6NSW7 305 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 SERPINA11Q86U17 422 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 KRT73Q86Y46 540 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 TREML1Q86YW5 311 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 C11orf65Q8NCR3 313 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 OR52P1PQ8NH57 321 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 GPR119Q8TDV5 335 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 WDYHV1Q96HA8 205 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 CCT8L2Q96SF2 557 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 ARMC7Q9H6L4 198 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 KAT8Q9H7Z6 458 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 NANOGQ9H9S0 305 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 ADAM21Q9UKJ8 722 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 FAM215AQ9Y5M1 114 aa17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 GPC6Q9Y625 555 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-208ENST00000558954 WIPF3A6NGB9 483 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 CLDN24A6NM45 220 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 DNAJA2O60884 412 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 PGCP20142 388 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 ELK4P28324 431 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 CLDN18P56856 261 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 RBBP4Q09028 425 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 FOXF1Q12946 379 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 ADRM1Q16186 407 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 BCL2A1Q16548 175 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 ZSWIM7Q19AV6 140 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 ACSF3Q4G176 576 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 MRPL2Q5T653 305 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 RNF220Q5VTB9 566 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 NET1Q7Z628 596 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 ARPINQ7Z6K5 226 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 SLC30A8Q8IWU4 369 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 HIPK4Q8NE63 616 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 OR5M1Q8NGP8 315 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 CMTM5Q96DZ9 223 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 MRGPRX4Q96LA9 322 aa17.06■□□□□ 0.32
RABGGTA-208ENST00000558954 RNF145Q96MT1 663 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms