RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 ACTL7BQ9Y614 415 aa10.68□□□□□ -0.7
HERC1-202ENST00000558324 PCNX3Q9H6A9 2034 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 TEP1Q99973 2627 aaKnown RBP10.67□□□□□ -0.7
HERC1-202ENST00000558324 GOLGA8QA0A0J9YX86 632 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 CENPVL1A0A0U1RR11 272 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 GOLGA8OA6NCC3 632 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 E9PBE3 544 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 GOLGA8NF8WBI6 632 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 C16orf97H3BN30 126 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 ANKRD28O15084 1053 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 ZNF264O43296 627 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 FCMRO60667 390 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 SOX30O94993 753 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 SNUPNO95149 360 aaKnown RBP10.67□□□□□ -0.7
HERC1-202ENST00000558324 ATE1O95260 518 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 TUBBP07437 444 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 OR12D1P0DN82 309 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 KITP10721 976 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 UBL4AP11441 157 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 ELK4P28324 431 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 CHI3L1P36222 383 aaPredicted RBP10.67□□□□□ -0.7
HERC1-202ENST00000558324 EIF1P41567 113 aaKnown RBP10.67□□□□□ -0.7
HERC1-202ENST00000558324 SUMO3P55854 103 aaPredicted RBP10.67□□□□□ -0.7
HERC1-202ENST00000558324 WDR4P57081 412 aaKnown RBP10.67□□□□□ -0.7
HERC1-202ENST00000558324 CARD18P57730 90 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 PHC1P78364 1004 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 OCRLQ01968 901 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 FAM174BQ3ZCQ3 159 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 PDSS1Q5T2R2 415 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 ANXA8L1Q5VT79 327 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 HMGN2P46Q86SG4 172 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 KIRREL3Q8IZU9 778 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 CHDHQ8NE62 594 aaPredicted RBP10.67□□□□□ -0.7
HERC1-202ENST00000558324 OR6K3Q8NGY3 331 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 ROBO4Q8WZ75 1007 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 OSTF1Q92882 214 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 PIK3IP1Q96FE7 263 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 GMPPAQ96IJ6 420 aaPredicted RBP10.67□□□□□ -0.7
HERC1-202ENST00000558324 SRXN1Q9BYN0 137 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 WDR55Q9H6Y2 383 aaPredicted RBP10.67□□□□□ -0.7
HERC1-202ENST00000558324 C12orf49Q9H741 205 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 PLEKHF2Q9H8W4 249 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 MEAF6Q9HAF1 191 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 PAQR5Q9NXK6 330 aaPredicted RBP10.67□□□□□ -0.7
HERC1-202ENST00000558324 ELOVL5Q9NYP7 299 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 HAO1Q9UJM8 370 aa10.67□□□□□ -0.7
HERC1-202ENST00000558324 PRSS51A0A1B0GVH4 220 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 SERINC4A6NH21 518 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 DUXAA6NLW8 204 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 SDHDO14521 159 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 ZNF195O14628 629 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 SIAH2O43255 324 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 EFNA2O43921 213 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 SCN2BO60939 215 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 SS18L1O75177 396 aaPredicted RBP10.66□□□□□ -0.7
HERC1-202ENST00000558324 STX11O75558 287 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 GOSR1O95249 250 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 C1QCP02747 245 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 ALDOCP09972 364 aaKnown RBP10.66□□□□□ -0.7
HERC1-202ENST00000558324 UBTFL6P0CB48 400 aaPredicted RBP10.66□□□□□ -0.7
HERC1-202ENST00000558324 PRKCAP17252 672 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 UQCRC2P22695 453 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 EPHA3P29320 983 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 AGTR1P30556 359 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 S100A3P33764 101 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 CLNS1AP54105 237 aaKnown RBP10.66□□□□□ -0.7
HERC1-202ENST00000558324 UFM1P61960 85 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 PPP2R2AP63151 447 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 CBFBQ13951 182 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 QPRTQ15274 297 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 ZNF239Q16600 458 aaKnown RBP10.66□□□□□ -0.7
HERC1-202ENST00000558324 ARHGAP11BQ3KRB8 267 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 TMEM176BQ3YBM2 270 aaPredicted RBP10.66□□□□□ -0.7
HERC1-202ENST00000558324 VPS37AQ8NEZ2 397 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 TOR1AIP2Q8NFQ8 470 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 OR5W2Q8NH69 310 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 GPR119Q8TDV5 335 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 ABHD3Q8WU67 409 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 XAGE5Q8WWM1 108 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 TESCQ96BS2 214 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 ZNF524Q96C55 264 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 REXO5Q96IC2 774 aaKnown RBP10.66□□□□□ -0.7
HERC1-202ENST00000558324 TEX37Q96LM6 180 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 SLC35A5Q9BS91 424 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 NMUR2Q9GZQ4 415 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 QRSL1Q9H0R6 528 aaKnown RBP10.66□□□□□ -0.7
HERC1-202ENST00000558324 CXXC4Q9H2H0 198 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 EXD2Q9NVH0 621 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 AIG1Q9NVV5 245 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 ZNF226Q9NYT6 803 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 KCNE5Q9UJ90 142 aa10.66□□□□□ -0.7
HERC1-202ENST00000558324 GPC6Q9Y625 555 aaPredicted RBP10.66□□□□□ -0.7
HERC1-202ENST00000558324 SPG11Q96JI7 2443 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 IGHV3-15A0A0B4J1V0 119 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 A0A1W2PNR3 127 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 GJE1A6NN92 205 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 DEFB108AA8MXU0 73 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 DIAPH2O60879 1101 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 UGT2B17O75795 530 aa10.65□□□□□ -0.7
HERC1-202ENST00000558324 AK1P00568 194 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms