RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 ACOT4Q8N9L9 421 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 BBOF1Q8ND07 529 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 TNIP2Q8NFZ5 429 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 CEP70Q8NHQ1 597 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 NEIL3Q8TAT5 605 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 SLC22A8Q8TCC7 542 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 BCAS4Q8TDM0 211 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 ZNF473Q8WTR7 871 aaKnown RBP5.47□□□□□ -1.53
CLPX-202ENST00000558103 GLMPQ8WWB7 406 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 ESAMQ96AP7 390 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 CFAP36Q96G28 342 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 SENP5Q96HI0 755 aaPredicted RBP5.47□□□□□ -1.53
CLPX-202ENST00000558103 REXO5Q96IC2 774 aaKnown RBP5.47□□□□□ -1.53
CLPX-202ENST00000558103 VPS39Q96JC1 886 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 F2RL3Q96RI0 385 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 TBCDQ9BTW9 1192 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 EFCAB11Q9BUY7 163 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 CAPS2Q9BXY5 557 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 ROGDIQ9GZN7 287 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 DERL2Q9GZP9 239 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 UBQLN3Q9H347 655 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 RHOJQ9H4E5 214 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 CHODLQ9H9P2 273 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 LIN7CQ9NUP9 197 aaKnown RBP5.47□□□□□ -1.53
CLPX-202ENST00000558103 DNAJC11Q9NVH1 559 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 WWOXQ9NZC7 414 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 CTNNAL1Q9UBT7 734 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 ZNF629Q9UEG4 869 aaPredicted RBP5.47□□□□□ -1.53
CLPX-202ENST00000558103 BOKQ9UMX3 212 aaPredicted RBP5.47□□□□□ -1.53
CLPX-202ENST00000558103 IKBKGQ9Y6K9 419 aa5.47□□□□□ -1.53
CLPX-202ENST00000558103 FN1P02751 2386 aaKnown RBP5.47□□□□□ -1.53
CLPX-202ENST00000558103 CLGNO14967 610 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 TRIM3O75382 744 aaPredicted RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 STK16O75716 305 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 EPPINO95925 133 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 RAF1P04049 648 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 CLPSP04118 112 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 HPNP05981 417 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 COX7A2P14406 83 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 CD1DP15813 335 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 TNNI3P19429 210 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 CPN2P22792 545 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 THBS4P35443 961 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 IDUAP35475 653 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 TIMP3P35625 211 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 CASP2P42575 452 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 MSH2P43246 934 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 SSR2P43308 183 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 NR4A2P43354 598 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 SLC37A1P57057 533 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 KCNJ2P63252 427 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 SORDQ00796 357 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 PLIN5Q00G26 463 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 TNFRSF17Q02223 184 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 TGM3Q08188 693 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 SF3A3Q12874 501 aaKnown RBP eCLIP5.46□□□□□ -1.54
CLPX-202ENST00000558103 CHIT1Q13231 466 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 FASTKD3Q14CZ7 662 aaKnown RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 EBPQ15125 230 aaKnown RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 OR4D1Q15615 310 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 ZKSCAN8Q15776 578 aaPredicted RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 NTRK2Q16620 822 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 PDK4Q16654 411 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 DEFB113Q30KQ7 82 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 PAGE2BQ5JRK9 111 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 BIVMQ86UB2 503 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 TRABD2AQ86V40 505 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 LACC1Q8IV20 430 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 OR4N5Q8IXE1 308 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 ST13P4Q8IZP2 240 aaPredicted RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 SLC35F6Q8N357 371 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 ZNF441Q8N8Z8 693 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 FBXO36Q8NEA4 188 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 SRFBP1Q8NEF9 429 aaKnown RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 C7orf57Q8NEG2 295 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 WFDC11Q8NEX6 87 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 OR10G3Q8NGC4 313 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 GOT1L1Q8NHS2 421 aaPredicted RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 FAM222BQ8WU58 562 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 RNASE6Q93091 150 aaKnown RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 NTNG2Q96CW9 530 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 ZNF845Q96IR2 970 aaPredicted RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 MAELQ96JY0 434 aaKnown RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 ART5Q96L15 291 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 RUNDC3BQ96NL0 473 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 DGAT2Q96PD7 388 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 ZNF717Q9BY31 904 aaPredicted RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 WWTR1Q9GZV5 400 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 PLEKHF2Q9H8W4 249 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 CNOT10Q9H9A5 744 aaKnown RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 CAB39LQ9H9S4 337 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 SMYD2Q9NRG4 433 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 ALKBH4Q9NXW9 302 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 CNIH4Q9P003 139 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 PTBP2Q9UKA9 531 aaKnown RBP5.46□□□□□ -1.54
CLPX-202ENST00000558103 SLC13A4Q9UKG4 626 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 SNX12Q9UMY4 172 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 SPACA6W5XKT8 324 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 DSCAMO60469 2012 aa5.46□□□□□ -1.54
CLPX-202ENST00000558103 PCNX3Q9H6A9 2034 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms