RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TRPT1Q86TN4 253 aaKnown RBP3.23□□□□□ -1.89
TDP1-217ENST00000557782 COMTD1Q86VU5 262 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 MARCH9Q86YJ5 346 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 SYCE1Q8N0S2 351 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 LKAAEAR1Q8TD35 194 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 TBCKQ8TEA7 893 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 IL1F10Q8WWZ1 152 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 PIBF1Q8WXW3 757 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 ARNTL2Q8WYA1 636 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 OR1E3Q8WZA6 343 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 NRGNQ92686 78 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 UBE2E3Q969T4 207 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 TMIGD2Q96BF3 282 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 ZNF486Q96H40 463 aaPredicted RBP3.23□□□□□ -1.89
TDP1-217ENST00000557782 C12orf42Q96LP6 360 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 FAM218AQ96MZ4 157 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 OR5B2Q96R09 309 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 PANX2Q96RD6 677 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 TNFRSF13CQ96RJ3 184 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 MAPKAP1Q9BPZ7 522 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 CABLES2Q9BTV7 478 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 ROGDIQ9GZN7 287 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 C8orf33Q9H7E9 229 aaPredicted RBP3.23□□□□□ -1.89
TDP1-217ENST00000557782 SYNDIG1Q9H7V2 258 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 NHEJ1Q9H9Q4 299 aaPredicted RBP3.23□□□□□ -1.89
TDP1-217ENST00000557782 POPDC2Q9HBU9 364 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 CCNB1IP1Q9NPC3 277 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 MTCH1Q9NZJ7 389 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 MYRFQ9Y2G1 1151 aa3.23□□□□□ -1.89
TDP1-217ENST00000557782 STK36Q9NRP7 1315 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 IGHV4-4A0A075B6R2 117 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 A0A1W2PR80 420 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 PLSCR5A0PG75 271 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 SMCO2A6NFE2 343 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 P2RY10O00398 339 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 UGT2B17O75795 530 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 AP2A2O94973 939 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 GAPDHP04406 335 aaKnown RBP3.22□□□□□ -1.89
TDP1-217ENST00000557782 PRSS1P07477 247 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 FCGR3AP08637 254 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 OR9G9P0C7N8 305 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 CD1DP15813 335 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 PAX1P15863 534 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 TUBG1P23258 451 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 STOMP27105 288 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 YWHABP31946 246 aaKnown RBP3.22□□□□□ -1.89
TDP1-217ENST00000557782 RFX3P48380 749 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 RAB10P61026 200 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 ERVK-16P61578 105 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 RPS27AP62979 156 aaKnown RBP3.22□□□□□ -1.89
TDP1-217ENST00000557782 KCNJ2P63252 427 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 GSTO1P78417 241 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 CDK16Q00536 496 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 MLF2Q15773 248 aaPredicted RBP3.22□□□□□ -1.89
TDP1-217ENST00000557782 NDUFA9Q16795 377 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 PPP1R3AQ16821 1122 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 ZNF829Q3KNS6 432 aaPredicted RBP3.22□□□□□ -1.89
TDP1-217ENST00000557782 BEX5Q5H9J7 111 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 MLIPQ5VWP3 458 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 WDR25Q64LD2 544 aaPredicted RBP3.22□□□□□ -1.89
TDP1-217ENST00000557782 WSCD1Q658N2 575 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 ZNF425Q6IV72 752 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 ERICH5Q6P6B1 374 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 LRRC31Q6UY01 552 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 SCARA5Q6ZMJ2 495 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 C19orf35Q6ZS72 473 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 TPRA1Q86W33 373 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 KCNMB4Q86W47 210 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 SPATA24Q86W54 205 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 HOGA1Q86XE5 327 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 PRIMA1Q86XR5 153 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 FAM58AQ8N1B3 248 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 PELI3Q8N2H9 469 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 MTURNQ8N3F0 131 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 FBXL16Q8N461 479 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 BPIFB2Q8N4F0 458 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 PQLC3Q8N755 202 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 SAMD12Q8N8I0 201 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 OR4D9Q8NGE8 314 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 RHEBL1Q8TAI7 183 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 SUN5Q8TC36 379 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 MARCH1Q8TCQ1 289 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 ACMSDQ8TDX5 336 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 PAQR8Q8TEZ7 354 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 RAB1CQ92928 201 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 CD101Q93033 1021 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 ZNF707Q96C28 371 aaPredicted RBP3.22□□□□□ -1.89
TDP1-217ENST00000557782 DNAJA3Q96EY1 480 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 CERS2Q96G23 380 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 ZNF641Q96N77 438 aaPredicted RBP3.22□□□□□ -1.89
TDP1-217ENST00000557782 P2RY13Q9BPV8 354 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 RBM4Q9BWF3 364 aaKnown RBP3.22□□□□□ -1.89
TDP1-217ENST00000557782 FBXO44Q9H4M3 255 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 IKZF5Q9H5V7 419 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 SP140LQ9H930 580 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 LYRM4Q9HD34 91 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 TUBG2Q9NRH3 451 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 PNO1Q9NRX1 252 aaKnown RBP3.22□□□□□ -1.89
TDP1-217ENST00000557782 PTTG3PQ9NZH4 202 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 CHMP5Q9NZZ3 219 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms