RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 G6PDP11413 515 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 ADH6P28332 368 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 SHC1P29353 583 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 ATP12AP54707 1039 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 NR1H2P55055 460 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 RNPS1Q15287 305 aaKnown RBP13.07□□□□□ -0.32
SHMT2-235ENST00000557740 PGS1Q32NB8 556 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 NDUFAF6Q330K2 333 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 TMEM201Q5SNT2 666 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHMT2-235ENST00000557740 EMBQ6PCB8 327 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 CBLN3Q6UW01 205 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 C22orf34Q6ZV56 151 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 WFDC8Q8IUA0 241 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 RIMKLAQ8IXN7 391 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 RFWD2Q8NHY2 731 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 RNF128Q8TEB7 428 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 AENQ8WTP8 325 aaKnown RBP13.07□□□□□ -0.32
SHMT2-235ENST00000557740 ABHD3Q8WU67 409 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 ROBO4Q8WZ75 1007 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 PERPQ96FX8 193 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 OR7D2Q96RA2 312 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 NOP53Q9NZM5 478 aaKnown RBP13.07□□□□□ -0.32
SHMT2-235ENST00000557740 ICAM5Q9UMF0 924 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 DTNAQ9Y4J8 743 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 ABCA2Q9BZC7 2435 aa13.07□□□□□ -0.32
SHMT2-235ENST00000557740 ARID1AO14497 2285 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 ZNF469Q96JG9 3925 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-235ENST00000557740 FAM171A2A8MVW0 826 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 UBL4AP11441 157 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 LOXP28300 417 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-235ENST00000557740 SLC7A1P30825 629 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 RPS26P62854 115 aaKnown RBP13.06□□□□□ -0.32
SHMT2-235ENST00000557740 HBA1P69905 142 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 LTBQ06643 244 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 SELENBP1Q13228 472 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 PDCD2Q16342 344 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-235ENST00000557740 TMEM176BQ3YBM2 270 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-235ENST00000557740 CLEC9AQ6UXN8 241 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 ZNF704Q6ZNC4 412 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-235ENST00000557740 Q71RC1 249 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-235ENST00000557740 FCRLAQ7L513 359 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 NUDCD3Q8IVD9 361 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 ATP6V1C2Q8NEY4 427 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 TOR1AIP2Q8NFQ8 470 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 OR5D16Q8NGK9 328 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 ZFP90Q8TF47 636 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 NUDT8Q8WV74 236 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 PKNOX2Q96KN3 472 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 MRGPRX4Q96LA9 322 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 Q96MF0 132 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 SMR3AQ99954 134 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 TACO1Q9BSH4 297 aaKnown RBP13.06□□□□□ -0.32
SHMT2-235ENST00000557740 SRXN1Q9BYN0 137 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 KLHL13Q9P2N7 655 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 GPR52Q9Y2T5 361 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 PCNX3Q9H6A9 2034 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 ROS1P08922 2347 aa13.06□□□□□ -0.32
SHMT2-235ENST00000557740 RNF103-CHMP3A0A140T963 221 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 DUXAA6NLW8 204 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 NPIPB9F8W1W9 429 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 TYROBPO43914 113 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 EIF4E2O60573 245 aaKnown RBP13.05□□□□□ -0.32
SHMT2-235ENST00000557740 AK1P00568 194 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 SERPINE1P05121 402 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 CREB1P16220 341 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 PRKCAP17252 672 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 PSMB1P20618 241 aaKnown RBP13.05□□□□□ -0.32
SHMT2-235ENST00000557740 CLDN8P56748 225 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 C21orf58P58505 322 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 EMX2Q04743 252 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 TOMM34Q15785 309 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-235ENST00000557740 KRT71Q3SY84 523 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 PDZK1Q5T2W1 519 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 ALKBH2Q6NS38 261 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 PLEKHM3Q6ZWE6 761 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 YTHDF3Q7Z739 585 aaKnown RBP13.05□□□□□ -0.32
SHMT2-235ENST00000557740 STEAP2Q8NFT2 490 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 OR5W2Q8NH69 310 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 GPR119Q8TDV5 335 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 ARL8AQ96BM9 186 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 SLC35G5Q96KT7 338 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 PPP1R36Q96LQ0 422 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 ZIM3Q96PE6 472 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 NMUR2Q9GZQ4 415 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 OR10A4Q9H209 315 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 COQ10BQ9H8M1 238 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 ASIC5Q9NY37 505 aa13.05□□□□□ -0.32
SHMT2-235ENST00000557740 SERINC4A6NH21 518 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 H7C1Q1 480 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 ZNF264O43296 627 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 KLF4O43474 513 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 EFNA2O43921 213 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 CYP7B1O75881 506 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 PRKD3O94806 890 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 MATN1P21941 496 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 IL32P24001 234 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 ETV4P43268 484 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 CBFBQ13951 182 aa13.04□□□□□ -0.32
SHMT2-235ENST00000557740 QPRTQ15274 297 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms