RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	SGCB	Q16585	318 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	AP5B1	Q2VPB7	878 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	GLYR1	Q49A26	553 aa	Predicted RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	DEPDC1	Q5TB30	811 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF470	Q6ECI4	717 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	C11orf63	Q6NUN7	778 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	MFSD12	Q6NUT3	480 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF544	Q6NX49	715 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	PGM2L1	Q6PCE3	622 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	TMPRSS11B	Q86T26	416 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	GPR180	Q86V85	440 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	P2RY8	Q86VZ1	359 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	CCDC25	Q86WR0	208 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	LMNTD2	Q8IXW0	634 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	UBQLNL	Q8IYU4	475 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	MYO1H	Q8N1T3	1032 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	LNX2	Q8N448	690 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	RNF10	Q8N5U6	811 aa	Known RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	DOK4	Q8TEW6	326 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	KCTD4	Q8WVF5	259 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	CCT6B	Q92526	530 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	TMCO6	Q96DC7	493 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	MUCL1	Q96DR8	90 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	PTCD3	Q96EY7	689 aa	Known RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	PDLIM5	Q96HC4	596 aa	Known RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	CHP1	Q99653	195 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	MRI1	Q9BV20	369 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	DDX47	Q9H0S4	455 aa	Known RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	STMN4	Q9H169	189 aa	Predicted RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	FOLH1B	Q9HBA9	442 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	MYOZ1	Q9NP98	299 aa	Predicted RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.13	□□□□□ -1.75	4e-7	■■■■■ 32.6
SCFD1-223	ENST00000557076	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	TAS2R13	Q9NYV9	303 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	KLRF1	Q9NZS2	232 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	XPR1	Q9UBH6	696 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	ASIC3	Q9UHC3	531 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	TRMT6	Q9UJA5	497 aa	Known RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	CFL2	Q9Y281	166 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	UQCRHL	A0A096LP55	91 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	PABPN1L	A6NDY0	278 aa	Known RBP	4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	WASHC1	A8K0Z3	465 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	EFCAB8	A8MWE9	144 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	ABCD4	O14678	606 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	T	O15178	435 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	LY6H	O94772	140 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	GUCA1C	O95843	209 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	ADA	P00813	363 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	IFNB1	P01574	187 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	TACSTD2	P09758	323 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	RAP2A	P10114	183 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	IL32	P24001	234 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	RBMX	P38159	391 aa	Known RBP	4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	HNMT	P50135	292 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	ARFIP1	P53367	373 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	CDH15	P55291	814 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	CLDN20	P56880	219 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	CDKL1	Q00532	357 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	THOC5	Q13769	683 aa	Known RBP	4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	GANAB	Q14697	944 aa	Known RBP	4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	ODF1	Q14990	250 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	OASL	Q15646	514 aa	Known RBP	4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	TIMM23B	Q5SRD1	257 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	C18orf63	Q68DL7	685 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR5M10	Q6IEU7	315 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR4C11	Q6IEV9	310 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	AADACL2	Q6P093	401 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	TMEM108	Q6UXF1	575 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	C4orf22	Q6V702	233 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	C1QL2	Q7Z5L3	287 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	DENND6A	Q8IWF6	608 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	TEX29	Q8N6K0	151 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	FADS6	Q8N9I5	356 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	SYT14	Q8NB59	555 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR52B6	Q8NGF0	335 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	RNF138	Q8WVD3	245 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	C3orf49	Q96BT1	292 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	OMA1	Q96E52	524 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	COL21A1	Q96P44	957 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	SERPINB12	Q96P63	405 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	BTBD9	Q96Q07	612 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	LRRC1	Q9BTT6	524 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	POTEKP	Q9BYX7	375 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	PRRG4	Q9BZD6	226 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	SLITRK2	Q9H156	845 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	NXF5	Q9H1B4	397 aa	Known RBP	4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	UNKL	Q9H9P5	680 aa	Known RBP	4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	PAK5	Q9P286	719 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	PHF11	Q9UIL8	331 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF180	Q9UJW8	692 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	DKKL1	Q9UK85	242 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	FBXO5	Q9UKT4	447 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	MTO1	Q9Y2Z2	717 aa	Known RBP	4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	SPEF1	Q9Y4P9	236 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	PTGDR2	Q9Y5Y4	395 aa		4.12	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZCWPW2	A0A1B0GU75	182 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR2M5	A3KFT3	312 aa		4.11	□□□□□ -1.75

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