RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 DPY19L1Q2PZI1 675 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 ELOA3BQ3SY89 546 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 ATAD3BQ5T9A4 648 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 ATG16L1Q676U5 607 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 CDC73Q6P1J9 531 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 MTERF4Q7Z6M4 381 aaKnown RBP6.61□□□□□ -1.35
SCFD1-222ENST00000556768 ADGRE4PQ86SQ3 457 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 KRTCAP2Q8N6L1 136 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF781Q8N8C0 355 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 RELL2Q8NC24 303 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-222ENST00000556768 ELOA3Q8NG57 546 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 PSMA8Q8TAA3 256 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 PHOSPHO1Q8TCT1 267 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 SFXN5Q8TD22 340 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 HOXB13Q92826 284 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-222ENST00000556768 PPP1R14AQ96A00 147 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 SH3YL1Q96HL8 342 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-222ENST00000556768 SH3GL2Q99962 352 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 PINK1Q9BXM7 581 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 AKTIPQ9H8T0 292 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 EXD2Q9NVH0 621 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 NKIRAS1Q9NYS0 192 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 GIMAP2Q9UG22 337 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 GDF2Q9UK05 429 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-222ENST00000556768 MCTS1Q9ULC4 181 aaKnown RBP6.61□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF175Q9Y473 711 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 NCOA6Q14686 2063 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 LOC100289279A0A1B0GTE1 492 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 PRSS51A0A1B0GVH4 220 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 GJE1A6NN92 205 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 A6NNC1 897 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 A8MXE2 369 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 KDM4EB2RXH2 506 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 SLCO1B7G3V0H7 640 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 RNASET2O00584 256 aaKnown RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 TGM6O95932 706 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 AK1P00568 194 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 IGKV1D-16P01601 117 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ACP2P11117 423 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CD1EP15812 388 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 LBPP18428 481 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 MATN1P21941 496 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 DNASE1P24855 282 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CPOXP36551 454 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CLNS1AP54105 237 aaKnown RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CTBP2P56545 445 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CLDN15P56746 228 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 RAC1P63000 192 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 FOXF2Q12947 444 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 PIN1Q13526 163 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 DAZAP2Q15038 168 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 PON3Q15166 354 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 STK32CQ86UX6 486 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 RIMKLAQ8IXN7 391 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 LRRC34Q8IZ02 419 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 TRIML2Q8N7C3 387 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF614Q8N883 585 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ANKRD42Q8N9B4 389 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 GATSQ8NAP1 163 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 BVESQ8NE79 360 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 OR8J2Q8NGG1 315 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 OR5M1Q8NGP8 315 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 B4GALNT2Q8NHY0 566 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 FAM110BQ8TC76 370 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CDS1Q92903 461 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 GIMAP5Q96F15 307 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 DACH2Q96NX9 599 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 RASSF1Q9NS23 344 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 THAP1Q9NVV9 213 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ASIC5Q9NY37 505 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF226Q9NYT6 803 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 FLRT3Q9NZU0 649 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 JKAMPQ9P055 326 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CLCF1Q9UBD9 225 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 EMC9Q9Y3B6 208 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 NINQ8N4C6 2090 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 A0A1W2PNV4 684 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 TRPC5OSA6NMA1 111 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ITM2AO43736 263 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 STX11O75558 287 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 BGNP21810 368 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CHI3L1P36222 383 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ANXA11P50995 505 aaKnown RBP6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ATP12AP54707 1039 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CLDN20P56880 219 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CARD18P57730 90 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 C21orf58P58505 322 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 B3GALT5-AS1P59052 145 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 HBA1P69905 142 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 LRRC74AQ0VAA2 488 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ANKRD39Q53RE8 183 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 DCST2Q5T1A1 773 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 CCNJQ5T5M9 372 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 POMZP3Q6PJE2 187 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 APOOLQ6UXV4 268 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 C20orf204Q6ZNR8 217 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 ESPNLQ6ZVH7 1005 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 FAM214BQ7L5A3 538 aa6.6□□□□□ -1.35
SCFD1-222ENST00000556768 C16orf62Q7Z3J2 963 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms