RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 ARSGQ96EG1 525 aa22.22■■□□□ 1.15
SDR39U1-221ENST00000556707 PSMG3-AS1Q96PY0 264 aa22.22■■□□□ 1.15
SDR39U1-221ENST00000556707 TREX2Q9BQ50 279 aaPredicted RBP22.22■■□□□ 1.15
SDR39U1-221ENST00000556707 TTYH2Q9BSA4 534 aa22.22■■□□□ 1.15
SDR39U1-221ENST00000556707 FAM53CQ9NYF3 392 aa22.22■■□□□ 1.15
SDR39U1-221ENST00000556707 ZNF337Q9Y3M9 751 aa22.22■■□□□ 1.15
SDR39U1-221ENST00000556707 DSPPQ9NZW4 1301 aa22.22■■□□□ 1.15
SDR39U1-221ENST00000556707 SHISA8B8ZZ34 492 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 LINGO3P0C6S8 592 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 UBTFL6P0CB48 400 aaPredicted RBP22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 PEPDP12955 493 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 ZNF708P17019 499 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 PGM1P36871 562 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 NUP107P57740 925 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 PMPCAQ10713 525 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 TRMT5Q32P41 509 aaKnown RBP22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 MMEL1Q495T6 779 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 ACSF3Q4G176 576 aaPredicted RBP22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 PRAMEF8Q5VWM4 474 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 PRAMEF7Q5VXH5 474 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 MRGPRGQ86SM5 289 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 CMIPQ8IY22 773 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 PEX5LQ8IYB4 626 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 ZNF808Q8N4W9 903 aaPredicted RBP22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 MAL2Q969L2 176 aa22.21■■□□□ 1.15
SDR39U1-221ENST00000556707 A0A0G2JPF8 293 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 LOC100653049A0A140TA62 436 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 HNRNPCL2B2RXH8 293 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 HNRNPCL3B7ZW38 293 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 HNRNPCL1O60812 293 aaKnown RBP22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 DNAJA2O60884 412 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 CYP7B1O75881 506 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 KRT34O76011 436 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 DBIP07108 87 aaKnown RBP22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 HNRNPCL4P0DMR1 293 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 GLI4P10075 376 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 ARAFP10398 606 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 POU3F2P20265 443 aaPredicted RBP22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 CCR4P51679 360 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 SRYQ05066 204 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 CYLC2Q14093 348 aaPredicted RBP22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 REP15Q6BDI9 236 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 XKRXQ6PP77 449 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 MTDHQ86UE4 582 aaKnown RBP22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 METTL25Q8N6Q8 603 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 ZPLD1Q8TCW7 415 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 WDR60Q8WVS4 1066 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 RND1Q92730 232 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 NPAS1Q99742 590 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 BCL2L10Q9HD36 194 aa22.2■■□□□ 1.14
SDR39U1-221ENST00000556707 CLDN24A6NM45 220 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 H0Y3Z8 333 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 MRASO14807 208 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 BCAS1O75363 584 aaPredicted RBP22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 EPPINO95925 133 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 NPPAP01160 153 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 NID1P14543 1247 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 IL7RP16871 459 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 AGAP20933 346 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 EIF1P41567 113 aaKnown RBP22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 CBFBQ13951 182 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 RPS26P11Q5JNZ5 115 aaPredicted RBP22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 POC1BQ8TC44 478 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 RNF145Q96MT1 663 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 THUMPD3Q9BV44 507 aaKnown RBP22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 CCDC106Q9BWC9 280 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 TMEM38AQ9H6F2 299 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 AP4B1Q9Y6B7 739 aa22.19■■□□□ 1.14
SDR39U1-221ENST00000556707 C5orf58C9J3I9 102 aa22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 H3BML4 177 aa22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 PSMA4P25789 261 aaKnown RBP22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 MTPNP58546 118 aa22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 PLAURQ03405 335 aa22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 SELPLGQ14242 412 aa22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 CAPRIN1Q14444 709 aaKnown RBP22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 TOMM34Q15785 309 aaPredicted RBP22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 ADRM1Q16186 407 aa22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 NSUN5P2Q63ZY6 315 aa22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 OR52P1PQ8NH57 321 aa22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 RP9Q8TA86 221 aaKnown RBP22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 BBS10Q8TAM1 723 aa22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 TUBA1CQ9BQE3 449 aa22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 TRIM8Q9BZR9 551 aa22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 EXOSC3Q9NQT5 275 aaKnown RBP22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 STOML1Q9UBI4 398 aa22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 GPC6Q9Y625 555 aaPredicted RBP22.18■■□□□ 1.14
SDR39U1-221ENST00000556707 CD8B2A6NJW9 211 aa22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 KDM4EB2RXH2 506 aaPredicted RBP22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 FXYD1O00168 92 aa22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 PGM3O95394 542 aa22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 ADH6P28332 368 aa22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 CDK6Q00534 326 aa22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 FOXF1Q12946 379 aa22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 MRPL2Q5T653 305 aaKnown RBP22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 REEP3Q6NUK4 255 aa22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 SEM1Q6ZVN7 128 aa22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 LACC1Q8IV20 430 aa22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 MEIOBQ8N635 442 aa22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 POU5F2Q8N7G0 328 aa22.17■■□□□ 1.14
SDR39U1-221ENST00000556707 PCYOX1LQ8NBM8 494 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms