RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	CMKLR1	Q99788	373 aa		11.52	□□□□□ -0.57
TMPO-212	ENST00000556029	CDCA4	Q9BXL8	241 aa		11.52	□□□□□ -0.57
TMPO-212	ENST00000556029	SIAE	Q9HAT2	523 aa		11.52	□□□□□ -0.57
TMPO-212	ENST00000556029	NEUROD4	Q9HD90	331 aa		11.52	□□□□□ -0.57
TMPO-212	ENST00000556029	CDH10	Q9Y6N8	788 aa		11.52	□□□□□ -0.57
TMPO-212	ENST00000556029	CACNA1E	Q15878	2313 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	CFI	P05156	583 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	IRF4	Q15306	451 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	TMEM107	Q6UX40	140 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	OR5T1	Q8NG75	326 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	HIST1H2AA	Q96QV6	131 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	SPNS1	Q9H2V7	528 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	CD93	Q9NPY3	652 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	FKBP14	Q9NWM8	211 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	FBXO9	Q9UK97	447 aa	Predicted RBP	11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	MEIS3P1	A6NDR6	274 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	ZAR1L	A6NP61	321 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	POM121C	A8CG34	1229 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	TNFSF12	O43508	249 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	GPX5	O75715	221 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	IGFBP1	P08833	259 aa	Predicted RBP	11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	MMP12	P39900	470 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	SEC23B	Q15437	767 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	ANKRD54	Q6NXT1	300 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	WDR53	Q7Z5U6	358 aa	Predicted RBP	11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	ACBD7	Q8N6N7	88 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	SLC38A5	Q8WUX1	472 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	OR5P2	Q8WZ92	322 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	CCDC32	Q9BV29	185 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	ATG5	Q9H1Y0	275 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	CLEC2D	Q9UHP7	191 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	FAM183A	A6NL82	134 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	HSD17B2	P37059	387 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	SNU13	P55769	128 aa	Known RBP	11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	VSX2	P58304	361 aa	Predicted RBP	11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	SLAMF1	Q13291	335 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	NKPD1	Q17RQ9	610 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	TMEM44	Q2T9K0	475 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	LRIT3	Q3SXY7	679 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	BCL7A	Q4VC05	210 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	HSD17B12	Q53GQ0	312 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	ALG10	Q5BKT4	473 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	MFSD8	Q8NHS3	518 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	STOML3	Q8TAV4	291 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	CLCC1	Q96S66	551 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	NELL2	Q99435	816 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	RAB11FIP5	Q9BXF6	653 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029		Q9N2J8	555 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	PLEKHM1	Q9Y4G2	1056 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	HEBP2	Q9Y5Z4	205 aa		11.51	□□□□□ -0.57
TMPO-212	ENST00000556029	PRAMEF25	A6NGN4	478 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	FAAH	O00519	579 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	HCRTR2	O43614	444 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	SPDEF	O95238	335 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	PLG	P00747	810 aa	Predicted RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	CTSL	P07711	333 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	BLK	P51451	505 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	CRYZ	Q08257	329 aa	Known RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.5	□□□□□ -0.57	3e-6	■■■□□ 19.2
TMPO-212	ENST00000556029	ZC3H14	Q6PJT7	736 aa	Known RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	USP53	Q70EK8	1073 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	BBS10	Q8TAM1	723 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	SNAPC3	Q92966	411 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	ZNF486	Q96H40	463 aa	Predicted RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	ZNF701	Q9NV72	531 aa	Predicted RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	QPCTL	Q9NXS2	382 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	TAAR2	Q9P1P5	351 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	GPN3	Q9UHW5	284 aa	Predicted RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	EDAR	Q9UNE0	448 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	HYKK	A2RU49	373 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	PRICKLE3	O43900	615 aa	Predicted RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	UBXN7	O94888	489 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	LDOC1	O95751	146 aa	Predicted RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	EFEMP2	O95967	443 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	EIF2S3	P41091	472 aa	Known RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	AQP2	P41181	271 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	MTNR1A	P48039	350 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	ZNF616	Q08AN1	781 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	EIF5AL1	Q6IS14	154 aa	Known RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	LILRA6	Q6PI73	481 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	TECPR1	Q7Z6L1	1165 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	TMEM17	Q86X19	198 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	LAS2	Q8IYD9	372 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	FRMD1	Q8N878	549 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	FAM46A	Q96IP4	442 aa	Known RBP	11.5	□□□□□ -0.57
TMPO-212	ENST00000556029		A8MVJ9	347 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	TMEM229A	B2RXF0	380 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	SCD	O00767	359 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	GABRB1	P18505	474 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	MFSD13A	Q14CX5	517 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	FLYWCH1	Q4VC44	716 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	HES5	Q5TA89	166 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	AADACL4	Q5VUY2	407 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	AGAP6	Q5VW22	663 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	NLRP8	Q86W28	1048 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	SFTPA1	Q8IWL2	248 aa		11.5	□□□□□ -0.57
TMPO-212	ENST00000556029	OR2T33	Q8NG76	320 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms