RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 GRIP2Q9C0E4 1043 aa6.95□□□□□ -1.3
PTCSC3-201ENST00000556013 NMUR2Q9GZQ4 415 aa6.95□□□□□ -1.3
PTCSC3-201ENST00000556013 C12orf65Q9H3J6 166 aaKnown RBP6.95□□□□□ -1.3
PTCSC3-201ENST00000556013 CXorf56Q9H5V9 222 aa6.95□□□□□ -1.3
PTCSC3-201ENST00000556013 ZNF395Q9H8N7 513 aaPredicted RBP6.95□□□□□ -1.3
PTCSC3-201ENST00000556013 BCO1Q9HAY6 547 aa6.95□□□□□ -1.3
PTCSC3-201ENST00000556013 GPATCH2Q9NW75 528 aa6.95□□□□□ -1.3
PTCSC3-201ENST00000556013 FBXO34Q9NWN3 711 aa6.95□□□□□ -1.3
PTCSC3-201ENST00000556013 ASIC5Q9NY37 505 aa6.95□□□□□ -1.3
PTCSC3-201ENST00000556013 LGALS13Q9UHV8 139 aa6.95□□□□□ -1.3
PTCSC3-201ENST00000556013 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.95□□□□□ -1.3
PTCSC3-201ENST00000556013 FLNAP21333 2647 aaKnown RBP6.95□□□□□ -1.3
PTCSC3-201ENST00000556013 HRNRQ86YZ3 2850 aaPredicted RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ZNF724A8MTY0 619 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 RNASET2O00584 256 aaKnown RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 TNFSF11O14788 317 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ZNF264O43296 627 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 EFNA2O43921 213 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 PEX11AO75192 247 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 GCM2O75603 506 aaPredicted RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 SLU7O95391 586 aaKnown RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 FESP07332 822 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 CHRNGP07510 517 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 BPGMP07738 259 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 PRKCAP17252 672 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 AGTR1P30556 359 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 CLK1P49759 484 aaKnown RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 MAP2K6P52564 334 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 TXNL4AP83876 142 aaKnown RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 SELENBP1Q13228 472 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ITGADQ13349 1161 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 CBFBQ13951 182 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 PDK3Q15120 406 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 CD226Q15762 336 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ZNF141Q15928 474 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ZNF239Q16600 458 aaKnown RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ARHGAP11BQ3KRB8 267 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 TMEM176BQ3YBM2 270 aaPredicted RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 DCST2Q5T1A1 773 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ANKRD34AQ69YU3 496 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 CBLN3Q6UW01 205 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ZNF704Q6ZNC4 412 aaPredicted RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 SZRD1Q7Z422 152 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 YTHDF3Q7Z739 585 aaKnown RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 P2RY8Q86VZ1 359 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 FNDC5Q8NAU1 212 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 VPS37AQ8NEZ2 397 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 OR7A2PQ8NGA2 310 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 OR5W2Q8NH69 310 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 FBXO27Q8NI29 283 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 MIPOL1Q8TD10 442 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 TMEM234Q8WY98 164 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ST8SIA1Q92185 356 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 PMM1Q92871 262 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 CDS1Q92903 461 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 GTPBP3Q969Y2 492 aaKnown RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 TRIM44Q96DX7 344 aaPredicted RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ZC3HAV1LQ96H79 300 aaKnown RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 DUSP26Q9BV47 211 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ACTR6Q9GZN1 396 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 LAT2Q9GZY6 243 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ESRP2Q9H6T0 727 aaKnown RBP6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 UBTD1Q9HAC8 227 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 POLE3Q9NRF9 147 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 SERINC1Q9NRX5 453 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 EXD2Q9NVH0 621 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 KLHL9Q9P2J3 617 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 KLHL13Q9P2N7 655 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 ZDHHC2Q9UIJ5 367 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 PCDHGB4Q9UN71 923 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 FIS1Q9Y3D6 152 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 PTGDR2Q9Y5Y4 395 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 CSPG4Q6UVK1 2322 aa6.94□□□□□ -1.3
PTCSC3-201ENST00000556013 PRSS51A0A1B0GVH4 220 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 SERINC4A6NH21 518 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 SMIM23A6NLE4 172 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 ESPNB1AK53 854 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 SHISA8B8ZZ34 492 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 OVOL3O00110 214 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 HS3ST1O14792 307 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 ANKRD28O15084 1053 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 BIRC5O15392 142 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 DNPH1O43598 174 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 TYROBPO43914 113 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 CYTIPO60759 359 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 STX11O75558 287 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 NUDT14O95848 222 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 LY6G6DO95868 133 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 C6orf47O95873 294 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 MATN1P21941 496 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 ETV4P43268 484 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 PTH2RP49190 550 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 HBA1P69905 142 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 ZNF117Q03924 483 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 IFFO1Q0D2I5 559 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 PTGR1Q14914 329 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 EXOC3L2Q2M3D2 409 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 DPY19L1Q2PZI1 675 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 NCMAPQ5T1S8 102 aa6.93□□□□□ -1.3
PTCSC3-201ENST00000556013 CCNJQ5T5M9 372 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms