RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 J3QRE1 110 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 BHLHE40O14503 412 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 SLC31A1O15431 190 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 IFNGP01579 166 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ZNF24P17028 368 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ZNF3P17036 446 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ELK1P19419 428 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 PTNP21246 168 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ACSL1P33121 698 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ZNF136P52737 540 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 SEC13P55735 322 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 CLDN20P56880 219 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 SIM1P81133 766 aaPredicted RBP6.49□□□□□ -1.37
TDP1-213ENST00000555880 INSL4Q14641 139 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 OR1Q1Q15612 314 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ITPRIPL2Q3MIP1 535 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 CCNJQ5T5M9 372 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 MRPL2Q5T653 305 aaKnown RBP6.49□□□□□ -1.37
TDP1-213ENST00000555880 ARL9Q6T311 187 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 TMEM91Q6ZNR0 172 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 USP53Q70EK8 1073 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 OR4N5Q8IXE1 308 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 TMEM99Q8N816 258 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 YIPF7Q8N8F6 280 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 SAMD12Q8N8I0 201 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 CDRT4Q8N9R6 151 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 OR5M3Q8NGP4 307 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ZFAND1Q8TCF1 268 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 PMM1Q92871 262 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 RFT1Q96AA3 541 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 BPIFA2Q96DR5 249 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 RNF31Q96EP0 1072 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 SCARF2Q96GP6 870 aaPredicted RBP6.49□□□□□ -1.37
TDP1-213ENST00000555880 DCLRE1CQ96SD1 692 aaKnown RBP6.49□□□□□ -1.37
TDP1-213ENST00000555880 TBX5Q99593 518 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 CDCA3Q99618 268 aaPredicted RBP6.49□□□□□ -1.37
TDP1-213ENST00000555880 KCNJ15Q99712 375 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ZNF559Q9BR84 538 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ZNF649Q9BS31 505 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 MARVELD1Q9BSK0 173 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 WACQ9BTA9 647 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 NIPAL2Q9H841 368 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 EVA1AQ9H8M9 152 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 MED20Q9H944 212 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ISG20L2Q9H9L3 353 aaKnown RBP6.49□□□□□ -1.37
TDP1-213ENST00000555880 TMEM27Q9HBJ8 222 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 LYRM4Q9HD34 91 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 CMC2Q9NRP2 79 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 DUSP22Q9NRW4 184 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 DZANK1Q9NVP4 752 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 KCMF1Q9P0J7 381 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 TBC1D29Q9UFV1 150 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 DAPP1Q9UN19 280 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 BAIAP2Q9UQB8 552 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 NOX1Q9Y5S8 564 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 A0A087WV62 115 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 A0A0G2JMP0 313 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 A0A0X1KG70 313 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ANKRD34BA5PLL1 514 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 INMT-MINDY4F8WBC2 141 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 AGRPO00253 132 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 SERPINA3P01011 423 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 C1QBP02746 253 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ZGLP1P0C6A0 271 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 GKN3PP0CG01 181 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 CHRNB1P11230 501 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 MAKP20794 623 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 NT5EP21589 574 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 RPS4Y1P22090 263 aaKnown RBP6.49□□□□□ -1.37
TDP1-213ENST00000555880 HTR2AP28223 471 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 NOS3P29474 1203 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 GDI1P31150 447 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 TNFRSF4P43489 277 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 PITPNBP48739 271 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ADPRHP54922 357 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 CTBP2P56545 445 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 CLDN2P57739 230 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 KIAA1024LP59773 190 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 RRAS2P62070 204 aaPredicted RBP6.49□□□□□ -1.37
TDP1-213ENST00000555880 RACK1P63244 317 aaKnown RBP6.49□□□□□ -1.37
TDP1-213ENST00000555880 POU4F2Q12837 409 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 FAPQ12884 760 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 MAB21L1Q13394 359 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 SHHQ15465 462 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 TCEA2Q15560 299 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 AMZ1Q400G9 498 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 C2orf27AQ580R0 203 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 YIF1BQ5BJH7 314 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 C9orf50Q5SZB4 431 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 GARNL3Q5VVW2 1013 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 HACD4Q5VWC8 232 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 VASNQ6EMK4 673 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ZCCHC12Q6PEW1 402 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 SYCE2Q6PIF2 218 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 ENPP7Q6UWV6 458 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 PAMR1Q6UXH9 720 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 TMPRSS11FQ6ZWK6 438 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 RD3Q7Z3Z2 195 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 PLCZ1Q86YW0 608 aa6.49□□□□□ -1.37
TDP1-213ENST00000555880 LIX1LQ8IVB5 337 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms