RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 GPATCH2Q9NW75 528 aa9.66□□□□□ -0.86
TDP1-212ENST00000555565 PAQR5Q9NXK6 330 aaPredicted RBP9.66□□□□□ -0.86
TDP1-212ENST00000555565 GIN1Q9NXP7 522 aa9.66□□□□□ -0.86
TDP1-212ENST00000555565 CLEC4AQ9UMR7 237 aa9.66□□□□□ -0.86
TDP1-212ENST00000555565 EMC9Q9Y3B6 208 aa9.66□□□□□ -0.86
TDP1-212ENST00000555565 SNX8Q9Y5X2 465 aa9.66□□□□□ -0.86
TDP1-212ENST00000555565 KCNE3Q9Y6H6 103 aa9.66□□□□□ -0.86
TDP1-212ENST00000555565 CR1P17927 2039 aa9.66□□□□□ -0.86
TDP1-212ENST00000555565 NPIPA5A0A0B4J1W7 369 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 NPIPA7E9PJI5 369 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 TNFSF11O14788 317 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 OIP5O43482 229 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 EFNA2O43921 213 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 SS18L1O75177 396 aaPredicted RBP9.65□□□□□ -0.86
TDP1-212ENST00000555565 LYPLA1O75608 230 aaPredicted RBP9.65□□□□□ -0.86
TDP1-212ENST00000555565 HSPA4LO95757 839 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 C6orf47O95873 294 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 PLGP00747 810 aaPredicted RBP9.65□□□□□ -0.86
TDP1-212ENST00000555565 BPGMP07738 259 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 LINGO3P0C6S8 592 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 NPIPA8P0DM63 369 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 ME2P23368 584 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 SHC1P29353 583 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 RNF144AP50876 292 aaPredicted RBP9.65□□□□□ -0.86
TDP1-212ENST00000555565 ATP5J2P56134 94 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 ZNF117Q03924 483 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 TP53BP2Q13625 1128 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 EXOC3L2Q2M3D2 409 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 KLHL26Q53HC5 615 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 DCST2Q5T1A1 773 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.65□□□□□ -0.86
TDP1-212ENST00000555565 ANKRD34AQ69YU3 496 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 CBLN3Q6UW01 205 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 DNM1P46Q6ZS02 220 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 ESPNLQ6ZVH7 1005 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 OR56A1Q8NGH5 318 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 OR6K3Q8NGY3 331 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 OR2V1Q8NHB1 315 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 ADAMTS15Q8TE58 950 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 CHMP6Q96FZ7 201 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 ZC3HAV1LQ96H79 300 aaKnown RBP9.65□□□□□ -0.86
TDP1-212ENST00000555565 ACTRT3Q9BYD9 372 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 KLHL4Q9C0H6 718 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 YAE1D1Q9NRH1 226 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 ATAD3AQ9NVI7 634 aa9.65□□□□□ -0.86
TDP1-212ENST00000555565 MCTS1Q9ULC4 181 aaKnown RBP9.65□□□□□ -0.86
TDP1-212ENST00000555565 NPIPB9F8W1W9 429 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 OVOL3O00110 214 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 KLF4O43474 513 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 SYNGR4O95473 234 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 PLAUP00749 431 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 THBDP07204 575 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 THBS1P07996 1170 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 FAM157CP0CG43 387 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 G6PDP11413 515 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 PRPS1L1P21108 318 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 ATP6V1C1P21283 382 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 EIF1P41567 113 aaKnown RBP9.64□□□□□ -0.87
TDP1-212ENST00000555565 CTBP2P56545 445 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 HBA1P69905 142 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 FOXF1Q12946 379 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 CLEC12BQ2HXU8 276 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 LSM12Q3MHD2 195 aaKnown RBP9.64□□□□□ -0.87
TDP1-212ENST00000555565 CHRFAM7AQ494W8 412 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 SPDYE7PQ495Y7 208 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 HBMQ6B0K9 141 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 EMBQ6PCB8 327 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 STAC2Q6ZMT1 411 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 MTERF4Q7Z6M4 381 aaKnown RBP9.64□□□□□ -0.87
TDP1-212ENST00000555565 LILRA2Q8N149 483 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 NATD1Q8N6N6 113 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 OR5AK3PQ8NH89 298 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 PHOSPHO1Q8TCT1 267 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 TMEM171Q8WVE6 324 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 OSTF1Q92882 214 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 CAVIN3Q969G5 261 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 ZNF524Q96C55 264 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 TUBGCP3Q96CW5 907 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 KLHL15Q96M94 604 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 PRPF18Q99633 342 aaKnown RBP9.64□□□□□ -0.87
TDP1-212ENST00000555565 TMEM109Q9BVC6 243 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 BHLHE41Q9C0J9 482 aaPredicted RBP9.64□□□□□ -0.87
TDP1-212ENST00000555565 ICAM5Q9UMF0 924 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 FAF1Q9UNN5 650 aaPredicted RBP9.64□□□□□ -0.87
TDP1-212ENST00000555565 CARD8Q9Y2G2 431 aa9.64□□□□□ -0.87
TDP1-212ENST00000555565 ITM2AO43736 263 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 TMCC2O75069 709 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 KRT16P08779 473 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 SFTPDP35247 375 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 P2RX1P51575 399 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 ATP12AP54707 1039 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 CLDN8P56748 225 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 CARD18P57730 90 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 C21orf58P58505 322 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 EMX2Q04743 252 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 TOMM34Q15785 309 aaPredicted RBP9.63□□□□□ -0.87
TDP1-212ENST00000555565 ZNF239Q16600 458 aaKnown RBP9.63□□□□□ -0.87
TDP1-212ENST00000555565 NDUFAF6Q330K2 333 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 PDSS1Q5T2R2 415 aa9.63□□□□□ -0.87
TDP1-212ENST00000555565 WDR93Q6P2C0 686 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms