RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 AP1ARQ63HQ0 302 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 GRAMD2AQ8IUY3 354 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 MEIOBQ8N635 442 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 GTF2H4Q92759 462 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 ADGRG7Q96K78 797 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 PINK1Q9BXM7 581 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 PAIP1Q9H074 479 aaKnown RBP12.3□□□□□ -0.44
SNX6-203ENST00000555416 SLC38A1Q9H2H9 487 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 RUBCNLQ9H714 662 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 EXD2Q9NVH0 621 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 SLAMF8Q9P0V8 285 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 ZNF629Q9UEG4 869 aaPredicted RBP12.3□□□□□ -0.44
SNX6-203ENST00000555416 DCTN4Q9UJW0 460 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 WDR45Q9Y484 360 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 AP4B1Q9Y6B7 739 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 PDZD2O15018 2839 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 A0A0J9YW62 118 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 SLC22A20A6NK97 555 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 LINC01387J3KSC0 135 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 DVL2O14641 736 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 ZNF264O43296 627 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 TNFSF13O75888 250 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 AQP8O94778 261 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 NTN1O95631 604 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 UBTFL6P0CB48 400 aaPredicted RBP12.29□□□□□ -0.44
SNX6-203ENST00000555416 ZCCHC18P0CG32 403 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 ETFAP13804 333 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 CAPN3P20807 821 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 ZNF41P51814 821 aaPredicted RBP12.29□□□□□ -0.44
SNX6-203ENST00000555416 PON3Q15166 354 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 GPAT3Q53EU6 434 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 BLOC1S3Q6QNY0 202 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 MSANTD1Q6ZTZ1 278 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 MSRB3Q8IXL7 192 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 ZNF619Q8N2I2 560 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 METTL25Q8N6Q8 603 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 TRIML2Q8N7C3 387 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 FBXO27Q8NI29 283 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 FNDC9Q8TBE3 224 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 ZBTB8AQ96BR9 441 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 ITCHQ96J02 903 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 TM9SF2Q99805 663 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 TPT1P8Q9HAU6 139 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 NPHS2Q9NP85 383 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 SLC25A37Q9NYZ2 338 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 JKAMPQ9P055 326 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 PCDHB14Q9Y5E9 798 aa12.29□□□□□ -0.44
SNX6-203ENST00000555416 A0A1W2PNV4 684 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 EEF1E1-BLOC1S5C9J1V9 151 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 H3BNH8 94 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 SYT5O00445 386 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 NR5A2O00482 541 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 EIF1AYO14602 144 aaKnown RBP12.28□□□□□ -0.44
SNX6-203ENST00000555416 TNFSF11O14788 317 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 EEF1E1O43324 174 aaKnown RBP12.28□□□□□ -0.44
SNX6-203ENST00000555416 EIF4E2O60573 245 aaKnown RBP12.28□□□□□ -0.44
SNX6-203ENST00000555416 DNAJA2O60884 412 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 CYP7B1O75881 506 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 NUDT14O95848 222 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 AGR2O95994 175 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 CSTAP01040 98 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 GUSBP08236 651 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 PRKCAP17252 672 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 PGM1P36871 562 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 CCR4P51679 360 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 SUMO3P55854 103 aaPredicted RBP12.28□□□□□ -0.44
SNX6-203ENST00000555416 LRRC74AQ0VAA2 488 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 SF3A3Q12874 501 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNX6-203ENST00000555416 FGFBP1Q14512 234 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 QPRTQ15274 297 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 FBXL19-AS1Q494R0 122 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 PAGE3Q5JUK9 113 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 C6orf10Q5SRN2 563 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 CGB2Q6NT52 195 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 VWA1Q6PCB0 445 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 C10orf111Q8N326 155 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 TMCO5AQ8N6Q1 288 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 FAM71CQ8NEG0 241 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 OR5W2Q8NH69 310 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 OR10D3Q8NH80 312 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 TRNT1Q96Q11 434 aaKnown RBP12.28□□□□□ -0.44
SNX6-203ENST00000555416 THUMPD3Q9BV44 507 aaKnown RBP12.28□□□□□ -0.44
SNX6-203ENST00000555416 LAT2Q9GZY6 243 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 ZNF385DQ9H6B1 395 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 POLE3Q9NRF9 147 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 CCDC167Q9P0B6 97 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 POLQO75417 2590 aa12.28□□□□□ -0.44
SNX6-203ENST00000555416 CSMD2Q7Z408 3487 aa12.27□□□□□ -0.44
SNX6-203ENST00000555416 CSMD1Q96PZ7 3565 aa12.27□□□□□ -0.44
SNX6-203ENST00000555416 ADAMDEC1O15204 470 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 CXCL13O43927 109 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 IL18BPO95998 194 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 NUDT7P0C024 238 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 UQCRC1P31930 480 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 SFTPDP35247 375 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 OPRM1P35372 400 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 CRATP43155 626 aa12.27□□□□□ -0.45
SNX6-203ENST00000555416 KIR2DL2P43627 348 aaPredicted RBP12.27□□□□□ -0.45
SNX6-203ENST00000555416 EIF1AXP47813 144 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms