RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SLC17A5Q9NRA2 495 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 PAK1IP1Q9NWT1 392 aaPredicted RBP4.1□□□□□ -1.75
VRK1-205ENST00000555402 PTBP2Q9UKA9 531 aaKnown RBP4.1□□□□□ -1.75
VRK1-205ENST00000555402 CLEC4AQ9UMR7 237 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 NPIPA1Q9UND3 350 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 SAMD4AQ9UPU9 718 aaKnown RBP4.1□□□□□ -1.75
VRK1-205ENST00000555402 CSAG2Q9Y5P2 127 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 PTCH1Q13635 1447 aa4.1□□□□□ -1.75
VRK1-205ENST00000555402 G3V4G9 280 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 OR7A17O14581 309 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 ZNF208O43345 1280 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 SNNO75324 88 aaPredicted RBP4.09□□□□□ -1.75
VRK1-205ENST00000555402 SCRG1O75711 98 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 DUSP14O95147 198 aaKnown RBP4.09□□□□□ -1.75
VRK1-205ENST00000555402 H2BFMP0C1H6 154 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 GATA2P23769 480 aaPredicted RBP4.09□□□□□ -1.75
VRK1-205ENST00000555402 LIM2P55344 173 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 DSCR10P59022 87 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 UBE2HP62256 183 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 RPL32P62910 135 aaKnown RBP4.09□□□□□ -1.75
VRK1-205ENST00000555402 CXCL6P80162 114 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 FGL1Q08830 312 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 RAB40BQ12829 278 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 RIPK1Q13546 671 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 DPYSL3Q14195 570 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 GLYR1Q49A26 553 aaPredicted RBP4.09□□□□□ -1.75
VRK1-205ENST00000555402 TCTEX1D4Q5JR98 221 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 RNLSQ5VYX0 342 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 SLC22A10Q63ZE4 541 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 FAM71F2Q6NXP2 309 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 CCDC80Q76M96 950 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 MOB3BQ86TA1 216 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 SERPINA9Q86WD7 417 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 CADM2Q8N3J6 435 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 C15orf54Q8N8G6 183 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 OR10A7Q8NGE5 316 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 OR51G2Q8NGK0 314 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 OR5L2Q8NGL0 311 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 EMG1Q92979 244 aaKnown RBP4.09□□□□□ -1.75
VRK1-205ENST00000555402 MS4A14Q96JA4 679 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 TGM7Q96PF1 710 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 ANP32EQ9BTT0 268 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 CAB39LQ9H9S4 337 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 NANSQ9NR45 359 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 ZNF221Q9UK13 617 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 IKBKGQ9Y6K9 419 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 SLCO1B1Q9Y6L6 691 aa4.09□□□□□ -1.75
VRK1-205ENST00000555402 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.08□□□□□ -1.76
VRK1-205ENST00000555402 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.08□□□□□ -1.76
VRK1-205ENST00000555402 FRG2CA6NGY1 282 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 BTN3A3O00478 584 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 PRRG1O14668 218 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 PGK1P00558 417 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 GDF1P27539 372 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 LAP3P28838 519 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 ADORA2BP29275 332 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 AIF1P55008 147 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 MAP2K1Q02750 393 aaPredicted RBP4.08□□□□□ -1.76
VRK1-205ENST00000555402 CUL1Q13616 776 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 Q1RN00 199 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 ATAD3CQ5T2N8 411 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 UFSP1Q6NVU6 142 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
VRK1-205ENST00000555402 POGZQ7Z3K3 1410 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 SLC39A11Q8N1S5 342 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 ZCCHC7Q8N3Z6 543 aaKnown RBP4.08□□□□□ -1.76
VRK1-205ENST00000555402 DHRSXQ8N5I4 330 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 EIF1ADQ8N9N8 165 aaKnown RBP4.08□□□□□ -1.76
VRK1-205ENST00000555402 TYMSOSQ8TAI1 123 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 PELI1Q96FA3 418 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 SPATA16Q9BXB7 569 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 ANKRD30BQ9BXX2 1392 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 CAPS2Q9BXY5 557 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 IKZF5Q9H5V7 419 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 APMAPQ9HDC9 416 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 COX16Q9P0S2 106 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 PIPOXQ9P0Z9 390 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 ABCD2Q9UBJ2 740 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 PCSK1NQ9UHG2 260 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 NAALAD2Q9Y3Q0 740 aa4.08□□□□□ -1.76
VRK1-205ENST00000555402 FAM220BPB1ANY3 271 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 UGT2B17O75795 530 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 SCGNO76038 276 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 HSMCR30P0CW71 290 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 EPHX2P34913 555 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 RPL29P47914 159 aaKnown RBP4.07□□□□□ -1.76
VRK1-205ENST00000555402 GANABQ14697 944 aaKnown RBP4.07□□□□□ -1.76
VRK1-205ENST00000555402 GSG1Q2KHT4 349 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 EXOC3L2Q2M3D2 409 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 ATL3Q6DD88 541 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 CCDC50Q8IVM0 306 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 VSTM4Q8IW00 320 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 ZNF679Q8IYX0 411 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 ATP6V0D2Q8N8Y2 350 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 OR4D5Q8NGN0 318 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 OR1F12Q8NHA8 337 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 MAIP1Q8WWC4 291 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 ARNTL2Q8WYA1 636 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 SHC3Q92529 594 aa4.07□□□□□ -1.76
VRK1-205ENST00000555402 PSKH2Q96QS6 385 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms