RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ME2P23368 584 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 MST1P26927 711 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 DPP4P27487 766 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 ACAA2P42765 397 aaKnown RBP11.52□□□□□ -0.57
SYNE2-219ENST00000555323 MAGEA5P43359 124 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 SLC6A8P48029 635 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 TDGF1P3P51864 188 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 NCALDP61601 193 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 TMEM44Q2T9K0 475 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 GLIPR1L2Q4G1C9 344 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 EIPR1Q53HC9 387 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 SLC25A53Q5H9E4 307 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 COLEC12Q5KU26 742 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 CBLL1Q75N03 491 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 ASRGL1Q7L266 308 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 ZNF550Q7Z398 422 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 YTHDF3Q7Z739 585 aaKnown RBP11.52□□□□□ -0.57
SYNE2-219ENST00000555323 GPR32P1Q8NGA4 272 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 FIG4Q92562 907 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 GPR137Q96N19 417 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 CADM1Q9BY67 442 aaKnown RBP11.52□□□□□ -0.57
SYNE2-219ENST00000555323 LRMDAQ9H2I8 198 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 MUC13Q9H3R2 512 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 ACTR3BQ9P1U1 418 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 EGFL7Q9UHF1 273 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 MAGEL2Q9UJ55 1249 aa11.52□□□□□ -0.57
SYNE2-219ENST00000555323 C7orf72A4D263 438 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 CFAP73A6NFT4 308 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 FAM166BA8MTA8 275 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 TFECO14948 347 aaPredicted RBP11.51□□□□□ -0.57
SYNE2-219ENST00000555323 GSTA4O15217 222 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 HCN1O60741 890 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 C1QL1O75973 258 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 WISP2O76076 250 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 OPN1SWP03999 348 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 FESP07332 822 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 TCN1P20061 433 aaPredicted RBP11.51□□□□□ -0.57
SYNE2-219ENST00000555323 GDF1P27539 372 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 ADH6P28332 368 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 MSX2P35548 267 aaPredicted RBP11.51□□□□□ -0.57
SYNE2-219ENST00000555323 RNF144AP50876 292 aaPredicted RBP11.51□□□□□ -0.57
SYNE2-219ENST00000555323 MS4A2Q01362 244 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 EPS8Q12929 822 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 TRAP1Q12931 704 aaKnown RBP11.51□□□□□ -0.57
SYNE2-219ENST00000555323 CBFBQ13951 182 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 NDUFAF6Q330K2 333 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 PRR30Q53SZ7 412 aaPredicted RBP11.51□□□□□ -0.57
SYNE2-219ENST00000555323 CYBRD1Q53TN4 286 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 ARSKQ6UWY0 536 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 TRILQ7L0X0 811 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 COMTD1Q86VU5 262 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 EID3Q8N140 333 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 SMYD1Q8NB12 490 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 FAM83FQ8NEG4 500 aaPredicted RBP11.51□□□□□ -0.57
SYNE2-219ENST00000555323 CPT1CQ8TCG5 803 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 SLC26A7Q8TE54 656 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 ZBTB8AQ96BR9 441 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 ZNF524Q96C55 264 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 SH3YL1Q96HL8 342 aaPredicted RBP11.51□□□□□ -0.57
SYNE2-219ENST00000555323 RNF145Q96MT1 663 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 KLHDC3Q9BQ90 382 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 PCDHAC1Q9H158 963 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 DEFB127Q9H1M4 99 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 DCAF13Q9NV06 445 aaKnown RBP11.51□□□□□ -0.57
SYNE2-219ENST00000555323 OLAHQ9NV23 265 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 MED17Q9NVC6 651 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 BAG5Q9UL15 447 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 SNX13Q9Y5W8 968 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 COL6A6A6NMZ7 2263 aa11.51□□□□□ -0.57
SYNE2-219ENST00000555323 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 NPIPA5E9PKD4 350 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 LINC01387J3KSC0 135 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 ACOT8O14734 319 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 GMNNO75496 209 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 TRAPPC6AO75865 159 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 NTN1O95631 604 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 CELA3AP09093 270 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 EDN3P14138 238 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 NCK1P16333 377 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 PGCP20142 388 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 PSMA4P25789 261 aaKnown RBP11.5□□□□□ -0.57
SYNE2-219ENST00000555323 EIF1P41567 113 aaKnown RBP11.5□□□□□ -0.57
SYNE2-219ENST00000555323 ZNF136P52737 540 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 MLLT10P55197 1068 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 NRF1Q16656 503 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 PLPPR5Q32ZL2 321 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 NHSL2Q5HYW2 709 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 LSMEM1Q8N8F7 131 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 NEIL3Q8TAT5 605 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 LZICQ8WZA0 190 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 ST8SIA1Q92185 356 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 ASB9Q96DX5 294 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 CLPTM1LQ96KA5 538 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 ARHGDIGQ99819 225 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 WFDC6Q9BQY6 131 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 ADPRHL2Q9NX46 363 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 KLHL28Q9NXS3 571 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 TAS2R10Q9NYW0 307 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 NPIPA1Q9UND3 350 aa11.5□□□□□ -0.57
SYNE2-219ENST00000555323 PCNX3Q9H6A9 2034 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms