RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ZNF658Q5TYW1 1059 aaPredicted RBP4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 OR5M10Q6IEU7 315 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 SYT10Q6XYQ8 523 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 C16orf62Q7Z3J2 963 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 APOBEC3FQ8IUX4 373 aaKnown RBP4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 LRRC43Q8N309 656 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 SYT14Q8NB59 555 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 STXBP6Q8NFX7 210 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 OR10A7Q8NGE5 316 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 OR13F1Q8NGS4 319 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 TRMT10AQ8TBZ6 339 aaKnown RBP4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 C7orf34Q96L11 122 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 CITED1Q99966 193 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 IKZF5Q9H5V7 419 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 CAB39LQ9H9S4 337 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 ELOVL3Q9HB03 270 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 SLC7A10Q9NS82 523 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 WRAP73Q9P2S5 460 aaPredicted RBP4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 SPRR3Q9UBC9 169 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 NPIPA1Q9UND3 350 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 MRPS33Q9Y291 106 aaKnown RBP4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 USP16Q9Y5T5 823 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 ALG6Q9Y672 507 aa4.05□□□□□ -1.76
CKS1BP1-201ENST00000555221 PRG4Q92954 1404 aaPredicted RBP4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 ANKRD30BQ9BXX2 1392 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 TNIKQ9UKE5 1360 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 FRMPD4Q14CM0 1322 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 STSP08842 583 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 IQCF3P0C7M6 154 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 CALB2P22676 271 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 RPL29P47914 159 aaKnown RBP4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 SPIBQ01892 262 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 OC90Q02509 493 aaPredicted RBP4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 SLC5A12Q1EHB4 618 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 SBK1Q52WX2 424 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 LRRC23Q53EV4 343 aaPredicted RBP4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 TTC23Q5W5X9 447 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 PYHIN1Q6K0P9 492 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 FAM71F2Q6NXP2 309 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 ZNF683Q8IZ20 524 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 LINC01561Q8N1V8 128 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 DHRSXQ8N5I4 330 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 CD177Q8N6Q3 437 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 ARNTL2Q8WYA1 636 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 FAM3CQ92520 227 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 SERAC1Q96JX3 654 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 C12orf66Q96MD2 445 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 KIR2DL4Q99706 377 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 C19orf24Q9BVV8 132 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 DEFB126Q9BYW3 111 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 NANSQ9NR45 359 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 ZNF275Q9NSD4 429 aaPredicted RBP4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 C6orf203Q9P0P8 240 aaPredicted RBP4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 APOBEC3BQ9UH17 382 aaKnown RBP4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 XPO7Q9UIA9 1087 aaKnown RBP4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 ZNF221Q9UK13 617 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 PPIAL4AQ9Y536 164 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 SMAD5-AS1Q9Y6J3 95 aa4.04□□□□□ -1.76
CKS1BP1-201ENST00000555221 CUL7Q14999 1698 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 ABCA5Q8WWZ7 1642 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 IGLV8-61A0A075B6I0 122 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 GPR89AB7ZAQ6 455 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 H3BMQ9 156 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 K7ENP7 123 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 OR7A17O14581 309 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 GPX5O75715 221 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 UGT2B17O75795 530 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 LRATO95237 230 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 GPR89BP0CG08 455 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 ZP3P21754 424 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 UQCRC2P22695 453 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 ADORA2BP29275 332 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 NMT1P30419 496 aaKnown RBP4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 UGT1A3P35503 534 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 HPCAL1P37235 193 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 LIM2P55344 173 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 MRPS11P82912 194 aaKnown RBP4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 PRR4Q16378 134 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 MOB3BQ86TA1 216 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 VASH2Q86V25 355 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 ZBED8Q8IZ13 594 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 LINC00612Q8N6U2 182 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 ANKFN1Q8N957 763 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 FAF2Q96CS3 445 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 SH3YL1Q96HL8 342 aaPredicted RBP4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 CRACR2AQ9BSW2 395 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 KLHL21Q9UJP4 597 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 RPH3ALQ9UNE2 315 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 PDE10AQ9Y233 779 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 MAB21L2Q9Y586 359 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 PRXQ9BXM0 1461 aa4.03□□□□□ -1.76
CKS1BP1-201ENST00000555221 FAM168BA1KXE4 195 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 ERI2A8K979 691 aaKnown RBP4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 PP2D1A8MPX8 630 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 WWP2O00308 870 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 BTN3A3O00478 584 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 FCN1O00602 326 aa4.02□□□□□ -1.77
CKS1BP1-201ENST00000555221 CDX4O14627 284 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms