RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 C12orf49Q9H741 205 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 HIDE1A8MVS5 230 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 FANCGO15287 622 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 TK1P04183 234 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 JAM2P57087 298 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 YIF1BQ5BJH7 314 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 NRMQ8IXM6 262 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 OR5P2Q8WZ92 322 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 REEP6Q96HR9 211 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 RTP3Q9BQQ7 232 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 YTHDF1Q9BYJ9 559 aaKnown RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 SSU72Q9NP77 194 aaKnown RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 PAQR5Q9NXK6 330 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 SLC6A14Q9UN76 642 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 CACNA1DQ01668 2161 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SLC22A31A6NKX4 558 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 H3BQ06 376 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 YIF1AO95070 293 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 CD63P08962 238 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 KIR2DL3P43628 341 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 EMX2Q04743 252 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 CST6Q15828 149 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 PLEKHS1Q5SXH7 462 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 NXPE4Q6UWF7 544 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SYT13Q7L8C5 426 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 ERMP1Q7Z2K6 904 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 KIAA1191Q96A73 305 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 CALHM2Q9HA72 323 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 USP36Q9P275 1121 aaKnown RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SLC7A7Q9UM01 511 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SLC6A5Q9Y345 797 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 ARPC1BO15143 372 aaKnown RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 COCHO43405 550 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 MYBPHQ13203 477 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF687Q8N1G0 1237 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 TEX26Q8N6G2 289 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 FAM3CQ92520 227 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SLC17A9Q9BYT1 436 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 HRH4Q9H3N8 390 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SPHK2Q9NRA0 654 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 KIF25Q9UIL4 384 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 TMX2-CTNND1H3BSU7 103 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 HTRA2O43464 458 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 CAPNS1P04632 268 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 HOXB5P09067 269 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SNCAP37840 140 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 DPY19L2P1Q6NXN4 242 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 DBX2Q6ZNG2 339 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 AMDHD1Q96NU7 426 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 ADAM19Q9H013 955 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 TCEAL2Q9H3H9 227 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 C8orf33Q9H7E9 229 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 KCNIP2Q9NS61 270 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 LRRC42Q9Y546 428 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 KIAA1210Q9ULL0 1709 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SCAMP2O15127 329 aaKnown RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 TMEM63AO94886 807 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 UBL4AP11441 157 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 MAKP20794 623 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 PTGER1P34995 402 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 PMPCAQ10713 525 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SNAPC3Q92966 411 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 OCSTAMPQ9BR26 566 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 PHLPP1O60346 1717 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 A0A096LPI6 279 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 P2RY2P41231 377 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 EMP2P54851 167 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 TDGQ13569 410 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 PEA15Q15121 130 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 RPL7L1Q6DKI1 246 aaKnown RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF705AQ6ZN79 300 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 LINC00696Q6ZRV3 163 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 ZFP90Q8TF47 636 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 PXDNQ92626 1479 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 A0A1W2PP18 115 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 RRP8O43159 456 aaKnown RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 RDH16O75452 317 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SLC22A5O76082 557 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 CLDN6P56747 220 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 VASNQ6EMK4 673 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 DCAF4L2Q8NA75 395 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 OR10X1Q8NGY0 326 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 MS4A4EQ96PG1 132 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 UTP23Q9BRU9 249 aaKnown RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 PSAT1Q9Y617 370 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 RETP07949 1114 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 F3P13726 295 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 PTGIRP43119 386 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 PCBD1P61457 104 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 CNN3Q15417 329 aaKnown RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 COQ5Q5HYK3 327 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 TANGO2Q6ICL3 276 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 EPGNQ6UW88 154 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 FAM109AQ8N4B1 249 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 BEST4Q8NFU0 473 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 SORCS2Q96PQ0 1159 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 TUBA1CQ9BQE3 449 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 DICER1Q9UPY3 1922 aaKnown RBP6.49□□□□□ -1.37
SYNE2-216ENST00000555002 NSG1A0A0A6YYJ2 146 aa6.49□□□□□ -1.37
SYNE2-216ENST00000555002 LRP5LA4QPB2 252 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms