RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 XAGE5Q8WWM1 108 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 MGLLQ99685 303 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 FNDC11Q9BVV2 318 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 GPR87Q9BY21 358 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 ALOXE3Q9BYJ1 711 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 MKKSQ9NPJ1 570 aaPredicted RBP16.07■□□□□ 0.16
SHOX-204ENST00000554971 GIMAP4Q9NUV9 329 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 RHCGQ9UBD6 479 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 LIPT1Q9Y234 373 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 CFL2Q9Y281 166 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 CACNA1BQ00975 2339 aa16.07■□□□□ 0.16
SHOX-204ENST00000554971 PNMA8CA0A1B0GUJ8 204 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 AGAP5A6NIR3 686 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 CYR61O00622 381 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 CDC123O75794 336 aaPredicted RBP16.06■□□□□ 0.16
SHOX-204ENST00000554971 LGI1O95970 557 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 CSNK2A2P19784 350 aaPredicted RBP16.06■□□□□ 0.16
SHOX-204ENST00000554971 SOX6P35712 828 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 SKP1P63208 163 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 PRR5P85299 388 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 SLAMF1Q13291 335 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 CEBPEQ15744 281 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 FAM26EQ8N5C1 309 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 OR2Y1Q8NGV0 311 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 CNTNAP3BQ96NU0 1288 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 YIPF2Q9BWQ6 316 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 PINK1Q9BXM7 581 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 CNTNAP3Q9BZ76 1288 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 SERHL2Q9H4I8 314 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 PRDM9Q9NQV7 894 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 LYARQ9NX58 379 aaKnown RBP16.06■□□□□ 0.16
SHOX-204ENST00000554971 A4GNTQ9UNA3 340 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 ENTPD4Q9Y227 616 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 ATG4BQ9Y4P1 393 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 A0A087WV48 116 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 IRGMA1A4Y4 181 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 TMEM8BA6NDV4 472 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 ZNF10P21506 573 aaPredicted RBP16.06■□□□□ 0.16
SHOX-204ENST00000554971 S100A5P33763 92 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 MPIP34949 423 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 IFNGR2P38484 337 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 KRR1Q13601 381 aaKnown RBP16.06■□□□□ 0.16
SHOX-204ENST00000554971 SYPL1Q16563 259 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 DEF8Q6ZN54 512 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 PLEKHG7Q6ZR37 379 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 TMEM80Q96HE8 168 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 TRNT1Q96Q11 434 aaKnown RBP16.06■□□□□ 0.16
SHOX-204ENST00000554971 CCNL2Q96S94 520 aaPredicted RBP16.06■□□□□ 0.16
SHOX-204ENST00000554971 POLDIP3Q9BY77 421 aaKnown RBP16.06■□□□□ 0.16
SHOX-204ENST00000554971 ROGDIQ9GZN7 287 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 ANKRD19PQ9H560 264 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 TRIM45Q9H8W5 580 aaPredicted RBP16.06■□□□□ 0.16
SHOX-204ENST00000554971 SP140LQ9H930 580 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 C3orf14Q9HBI5 128 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 FBXW2Q9UKT8 454 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 PTRH2Q9Y3E5 179 aaKnown RBP16.06■□□□□ 0.16
SHOX-204ENST00000554971 CLDN16Q9Y5I7 305 aa16.06■□□□□ 0.16
SHOX-204ENST00000554971 CHD6Q8TD26 2715 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 EMC8O43402 210 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 SEMA7AO75326 666 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 PRKRAO75569 313 aaKnown RBP16.05■□□□□ 0.16
SHOX-204ENST00000554971 SNX4O95219 450 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 SCG5P05408 212 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 ENDOUP21128 410 aaKnown RBP16.05■□□□□ 0.16
SHOX-204ENST00000554971 POU1F1P28069 291 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 ETV6P41212 452 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 RPS15P62841 145 aaKnown RBP16.05■□□□□ 0.16
SHOX-204ENST00000554971 CDC20Q12834 499 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 SEC23BQ15437 767 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 ENTPD8Q5MY95 495 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 SLC48A1Q6P1K1 146 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 C1orf94Q6P1W5 598 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 SAMD14Q8IZD0 417 aaPredicted RBP16.05■□□□□ 0.16
SHOX-204ENST00000554971 SLC7A13Q8TCU3 470 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 UCN3Q969E3 161 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 PRRC1Q96M27 445 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 OR1F2PQ96R84 312 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 TAPBPLQ9BX59 468 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 VN1R1Q9GZP7 353 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 ZBTB20Q9HC78 741 aaPredicted RBP16.05■□□□□ 0.16
SHOX-204ENST00000554971 LYRM4Q9HD34 91 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 C5AR2Q9P296 337 aa16.05■□□□□ 0.16
SHOX-204ENST00000554971 GPN3Q9UHW5 284 aaPredicted RBP16.05■□□□□ 0.16
SHOX-204ENST00000554971 PRAMEF27A3QJZ7 478 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 SNTNA6NMZ2 147 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 WASHC1A8K0Z3 465 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 NME6O75414 186 aaPredicted RBP16.04■□□□□ 0.16
SHOX-204ENST00000554971 RNH1P13489 461 aaKnown RBP16.04■□□□□ 0.16
SHOX-204ENST00000554971 RAB38P57729 211 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 ATP1A1-AS1Q5TC04 95 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 MFSD4BQ5TF39 518 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 C18orf63Q68DL7 685 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 FAM180BQ6P0A1 224 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 MED25Q71SY5 747 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 BTLAQ7Z6A9 289 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 PROKR2Q8NFJ6 384 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 KIAA1143Q96AT1 154 aaPredicted RBP16.04■□□□□ 0.16
SHOX-204ENST00000554971 MND1Q9BWT6 205 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 CPNE5Q9HCH3 593 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 CES1P1Q9UKY3 287 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms