RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CLCA1A8K7I4 914 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 H0Y3Z8 333 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 FXYD1O00168 92 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 AP3D1O14617 1153 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 ZNF264O43296 627 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 CSTAP01040 98 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 BMP2P12643 396 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 GABRA1P14867 456 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 POU3F2P20265 443 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-214ENST00000554928 MSX1P28360 303 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 P2RX1P51575 399 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 CCR4P51679 360 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 MTPNP58546 118 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 GNGT1P63211 74 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 IRX1P78414 480 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-214ENST00000554928 HPCAP84074 193 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 ADRM1Q16186 407 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 AAGABQ6PD74 315 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 MAMDC2Q7Z304 686 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-214ENST00000554928 ADGRE4PQ86SQ3 457 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 GGNQ86UU5 652 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 SNX32Q86XE0 403 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 GTPBP8Q8N3Z3 284 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-214ENST00000554928 DPP10Q8N608 796 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 TMCO5AQ8N6Q1 288 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 POU5F2Q8N7G0 328 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 OR10Q1Q8NGQ4 319 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 FBXO27Q8NI29 283 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 RND1Q92730 232 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 ZDHHC16Q969W1 377 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 ZNF845Q96IR2 970 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-214ENST00000554928 THUMPD3Q9BV44 507 aaKnown RBP11.14□□□□□ -0.63
SYNE2-214ENST00000554928 LAT2Q9GZY6 243 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 POLE3Q9NRF9 147 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 RLIMQ9NVW2 624 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 P2RX2Q9UBL9 471 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 LIPT1Q9Y234 373 aa11.14□□□□□ -0.63
SYNE2-214ENST00000554928 SPTBN1Q01082 2364 aaKnown RBP11.13□□□□□ -0.63
SYNE2-214ENST00000554928 LOC100653049A0A140TA62 436 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 NKX2-6A6NCS4 301 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 FAM90A27PA6NNH2 459 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 AHRRA9YTQ3 701 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 H3BNH8 94 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 ANGPT2O15123 496 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 DNAJA2O60884 412 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 KRT34O76011 436 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 NTN1O95631 604 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 NUDT14O95848 222 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 EPPINO95925 133 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 TGM6O95932 706 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 PEPDP12955 493 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 PRKCAP17252 672 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 AGFG1P52594 562 aaKnown RBP11.13□□□□□ -0.63
SYNE2-214ENST00000554928 SMSP52788 366 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 KCNJ10P78508 379 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 NFYCQ13952 458 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 QPRTQ15274 297 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 CTU2Q2VPK5 515 aaKnown RBP11.13□□□□□ -0.63
SYNE2-214ENST00000554928 GLYR1Q49A26 553 aaPredicted RBP11.13□□□□□ -0.63
SYNE2-214ENST00000554928 NSUN5P2Q63ZY6 315 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 REP15Q6BDI9 236 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 ZNF787Q6DD87 383 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 TMEM211Q6ICI0 200 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 MTFR2Q6P444 385 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 POMZP3Q6PJE2 187 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 ENPP6Q6UWR7 440 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 ZNF836Q6ZNA1 936 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 SPATA21Q7Z572 469 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 COMTD1Q86VU5 262 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 TREML1Q86YW5 311 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 PM20D2Q8IYS1 436 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 OR5W2Q8NH69 310 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 NFKBIDQ8NI38 313 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 ZPLD1Q8TCW7 415 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 FIG4Q92562 907 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 ANKRD27Q96NW4 1050 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 CGREF1Q99674 301 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 TREX2Q9BQ50 279 aaPredicted RBP11.13□□□□□ -0.63
SYNE2-214ENST00000554928 PIGQQ9BRB3 760 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 A4GALTQ9NPC4 353 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 DNAJB12Q9NXW2 375 aaKnown RBP11.13□□□□□ -0.63
SYNE2-214ENST00000554928 CLCF1Q9UBD9 225 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 GMEB1Q9Y692 573 aa11.13□□□□□ -0.63
SYNE2-214ENST00000554928 NBPF19A0A087WUL8 3843 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 A0A087WZY1 265 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 A0A0J9YW62 118 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 C7orf72A4D263 438 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 PRSS44E7EML9 344 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 EIF4E2O60573 245 aaKnown RBP11.12□□□□□ -0.63
SYNE2-214ENST00000554928 GKN3PP0CG01 181 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 ARAFP10398 606 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 GP1BBP13224 206 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 ZNF17P17021 662 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 GPX2P18283 190 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 CEACAM8P31997 349 aaPredicted RBP11.12□□□□□ -0.63
SYNE2-214ENST00000554928 RYKP34925 604 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 GCKP35557 465 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 MAGEA8P43361 318 aa11.12□□□□□ -0.63
SYNE2-214ENST00000554928 ANXA11P50995 505 aaKnown RBP11.12□□□□□ -0.63
SYNE2-214ENST00000554928 ZNF41P51814 821 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms