RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 SNRNP200O75643 2136 aaKnown RBP10.33□□□□□ -0.76
SRP54-205ENST00000554803 B4E171 279 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 H3BN98 237 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 RGS5O15539 181 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 SCO2O43819 266 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 KCNJ13O60928 360 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 NME6O75414 186 aaPredicted RBP10.32□□□□□ -0.76
SRP54-205ENST00000554803 CLEC3AO75596 197 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 AGR2O95994 175 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 PDGFAP04085 211 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 TSPAN19P0C672 248 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 CPN2P22792 545 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 GTF2E2P29084 291 aaKnown RBP10.32□□□□□ -0.76
SRP54-205ENST00000554803 ERP29P30040 261 aaKnown RBP10.32□□□□□ -0.76
SRP54-205ENST00000554803 NTSP30990 170 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 TSPAN7P41732 249 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 CLCNKAP51800 687 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 MRPS15P82914 257 aaKnown RBP10.32□□□□□ -0.76
SRP54-205ENST00000554803 CDK5Q00535 292 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 ILF3Q12906 894 aaKnown RBP eCLIP10.32□□□□□ -0.76
SRP54-205ENST00000554803 TRAM1Q15629 374 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 MPEG1Q2M385 716 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 GLYR1Q49A26 553 aaPredicted RBP10.32□□□□□ -0.76
SRP54-205ENST00000554803 MINDY4Q4G0A6 757 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 CCSMST1Q4G0I0 132 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 DCAF12Q5T6F0 453 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 LCN1P1Q5VSP4 162 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 THOC7Q6I9Y2 204 aaKnown RBP10.32□□□□□ -0.76
SRP54-205ENST00000554803 CD200R1LQ6Q8B3 271 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 Q6ZPB1 254 aaPredicted RBP10.32□□□□□ -0.76
SRP54-205ENST00000554803 C6orf120Q7Z4R8 191 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 SNX29P2Q8IUI4 249 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 SFTPA2Q8IWL1 248 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 PHC2Q8IXK0 858 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 TCTE3Q8IZS6 198 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 RNF175Q8N4F7 328 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 ASCC1Q8N9N2 400 aaKnown RBP10.32□□□□□ -0.76
SRP54-205ENST00000554803 AGBL5Q8NDL9 886 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 OR56A1Q8NGH5 318 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 LILRB4Q8NHJ6 448 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 PRR7Q8TB68 274 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 GNPDA2Q8TDQ7 276 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 CREB3L4Q8TEY5 395 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 ASB15Q8WXK1 588 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 UFD1Q92890 307 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 MARVELD3Q96A59 401 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 POM121Q96HA1 1249 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 SDHCQ99643 169 aaPredicted RBP10.32□□□□□ -0.76
SRP54-205ENST00000554803 FNDC11Q9BVV2 318 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 GON7Q9BXV9 100 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 GSDMCQ9BYG8 508 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 CXorf36Q9H7Y0 433 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 NIPAL2Q9H841 368 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 AMBNQ9NP70 447 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 EXOSC4Q9NPD3 245 aaKnown RBP10.32□□□□□ -0.76
SRP54-205ENST00000554803 PRDM9Q9NQV7 894 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 ASB6Q9NWX5 421 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 RABL2AQ9UBK7 228 aaPredicted RBP10.32□□□□□ -0.76
SRP54-205ENST00000554803 TBC1D29Q9UFV1 150 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 TBC1D24Q9ULP9 559 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 RABL2BQ9UNT1 228 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 LIPT1Q9Y234 373 aa10.32□□□□□ -0.76
SRP54-205ENST00000554803 ZGRF1Q86YA3 2104 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 TRBV4-1A0A0J9YWV2 114 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 TRDV1A0A1B0GX56 115 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 FFAR1O14842 300 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 AKAP8O43823 692 aaKnown RBP10.31□□□□□ -0.76
SRP54-205ENST00000554803 SLC19A2O60779 497 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 RECKO95980 971 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 TGFB1P01137 390 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 BCHEP06276 602 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 RPS19P39019 145 aaKnown RBP10.31□□□□□ -0.76
SRP54-205ENST00000554803 ACTR1BP42025 376 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 GPR3P46089 330 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 GIPRP48546 466 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 LIM2P55344 173 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 OR1D5P58170 312 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 ACTR1AP61163 376 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 EFNB1P98172 346 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 DSG2Q14126 1118 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 CDK10Q15131 360 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 AMZ1Q400G9 498 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 HSD17B12Q53GQ0 312 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 SLC35F1Q5T1Q4 408 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 ATAD3CQ5T2N8 411 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 QSOX2Q6ZRP7 698 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 SAMD14Q8IZD0 417 aaPredicted RBP10.31□□□□□ -0.76
SRP54-205ENST00000554803 LMNTD1Q8N9Z9 388 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 SRFBP1Q8NEF9 429 aaKnown RBP10.31□□□□□ -0.76
SRP54-205ENST00000554803 OR5AR1Q8NGP9 310 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 TEX47Q8TBZ9 253 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 TMEM163Q8TC26 289 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 CAPSLQ8WWF8 208 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 CIDECQ96AQ7 238 aaPredicted RBP10.31□□□□□ -0.76
SRP54-205ENST00000554803 TM4SF18Q96CE8 201 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 KCTD12Q96CX2 325 aaKnown RBP10.31□□□□□ -0.76
SRP54-205ENST00000554803 SLC35G5Q96KT7 338 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 FRMD6Q96NE9 622 aa10.31□□□□□ -0.76
SRP54-205ENST00000554803 INSM2Q96T92 566 aaPredicted RBP10.31□□□□□ -0.76
SRP54-205ENST00000554803 NRTNQ99748 197 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms