RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 OR5M11Q96RB7 305 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 MYCBPQ99417 103 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-213ENST00000554776 SLC30A2Q9BRI3 323 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 FEM1AQ9BSK4 669 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 DUSP16Q9BY84 665 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 CRNKL1Q9BZJ0 848 aaKnown RBP2.35□□□□□ -2.03
SCFD1-213ENST00000554776 ELOVL4Q9GZR5 314 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 MAGT1Q9H0U3 335 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 GLT8D2Q9H1C3 349 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 CAB39LQ9H9S4 337 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 SIGLEC8Q9NYZ4 499 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 EHFQ9NZC4 300 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 IL36GQ9NZH8 169 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 ZNF221Q9UK13 617 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 PDE10AQ9Y233 779 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 MRPS7Q9Y2R9 242 aaKnown RBP2.35□□□□□ -2.03
SCFD1-213ENST00000554776 FRMPD4Q14CM0 1322 aa2.35□□□□□ -2.03
SCFD1-213ENST00000554776 PTCH1Q13635 1447 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 POGZQ7Z3K3 1410 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 C15orf38-AP3S2A0A0A6YYH1 394 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 IGHV3-35A0A0C4DH35 117 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 MBLAC1A4D2B0 266 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 BTN3A3O00478 584 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 OR7A17O14581 309 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 CDX4O14627 284 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 GPAA1O43292 621 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 ZNF208O43345 1280 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 GPX5O75715 221 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 THY1P04216 161 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 CCDC166P0CW27 439 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 POLR2EP19388 210 aaKnown RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 MMP11P24347 488 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 FASP25445 335 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 ADORA2BP29275 332 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 MDH2P40926 338 aaKnown RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 FNTAP49354 379 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 DHPSP49366 369 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 STARP49675 285 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 SLC25A1P53007 311 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 HMGN5P82970 282 aaKnown RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 MAP2K1Q02750 393 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 GSG1Q2KHT4 349 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 GLYR1Q49A26 553 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 PAN3Q58A45 887 aaKnown RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 DCST2Q5T1A1 773 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 ATAD3CQ5T2N8 411 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 MARC1Q5VT66 337 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 SLC22A10Q63ZE4 541 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 CGB2Q6NT52 195 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 FAM199XQ6PEV8 388 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 C16orf62Q7Z3J2 963 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 TMEM110Q86TL2 294 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 SERINC5Q86VE9 423 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 SERPINA9Q86WD7 417 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 ZNF679Q8IYX0 411 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 ZNF683Q8IZ20 524 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 FBXL16Q8N461 479 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 ATP6V0D2Q8N8Y2 350 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 EIF1ADQ8N9N8 165 aaKnown RBP2.34□□□□□ -2.03
SCFD1-213ENST00000554776 OR4D5Q8NGN0 318 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 OR8J1Q8NGP2 316 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 OR1F12Q8NHA8 337 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 RLN3Q8WXF3 142 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 PIGCQ92535 297 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 BADQ92934 168 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 VSIG2Q96IQ7 327 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 NPAS2Q99743 824 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 OMDQ99983 421 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 SPATA16Q9BXB7 569 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 POLE4Q9NR33 117 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 ABCD2Q9UBJ2 740 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 RIMS3Q9UJD0 308 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 ANGPTL2Q9UKU9 493 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 RABL2BQ9UNT1 228 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 NAALAD2Q9Y3Q0 740 aa2.34□□□□□ -2.03
SCFD1-213ENST00000554776 ANKRD30BQ9BXX2 1392 aa2.34□□□□□ -2.04
SCFD1-213ENST00000554776 ADAMTS9Q9P2N4 1935 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 LOC100131303A0A0U1RQF7 123 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 MSH4O15457 936 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 TPST2O60704 377 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 SURF6O75683 361 aaKnown RBP2.33□□□□□ -2.04
SCFD1-213ENST00000554776 RHOBTB1O94844 696 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 PGK1P00558 417 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 ZNF44P15621 663 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 SERPINA2P20848 420 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 VDAC1P21796 283 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 HMGB2P26583 209 aaKnown RBP2.33□□□□□ -2.04
SCFD1-213ENST00000554776 EPHX2P34913 555 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 P2RY1P47900 373 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 RPL29P47914 159 aaKnown RBP2.33□□□□□ -2.04
SCFD1-213ENST00000554776 RPL34P49207 117 aaKnown RBP2.33□□□□□ -2.04
SCFD1-213ENST00000554776 HLCSP50747 726 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 AP3M2P53677 418 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 MRPS11P82912 194 aaKnown RBP2.33□□□□□ -2.04
SCFD1-213ENST00000554776 CD47Q08722 323 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 RAB40BQ12829 278 aa2.33□□□□□ -2.04
SCFD1-213ENST00000554776 ELAVL3Q14576 367 aaKnown RBP2.33□□□□□ -2.04
SCFD1-213ENST00000554776 Q1RN00 199 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms