RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 OXSR1O95747 527 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 YES1P07947 543 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 GIPP09681 153 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 DEFA4P12838 97 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF28P17035 718 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SSTR4P31391 388 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 GSK3AP49840 483 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 GDF10P55107 478 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 BAXQ07812 192 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 MRPL49Q13405 166 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 PDCD1Q15116 288 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 KHDC1Q4VXA5 237 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 KRTCAP2Q8N6L1 136 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 CSNK1A1LQ8N752 337 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 MITD1Q8WV92 249 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 LAMB4A4D0S4 1761 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 IFNA10P01566 189 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 APOC3P02656 99 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 MT-ND4P03905 459 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 PNMTP11086 282 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 CELP19835 753 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 HSF1Q00613 529 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SULT2A1Q06520 285 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 MELKQ14680 651 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 TXNRD3NBQ6F5E7 133 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 FAM199XQ6PEV8 388 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 OR8U1Q8NH10 309 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SEC14L1Q92503 715 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 RLIMQ9NVW2 624 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SPHK1Q9NYA1 384 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 LOC730098B7Z3J9 87 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 H3BNX3 289 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 RAB10P61026 200 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM25Q86YD3 366 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 CILP2Q8IUL8 1156 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 OR4K1Q8NGD4 311 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 DEFB104AQ8WTQ1 72 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 LRFN3Q9BTN0 628 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SEZ6LQ9BYH1 1024 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 IL22Q9GZX6 179 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SQORQ9Y6N5 450 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SLX4Q8IY92 1834 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 HECW2Q9P2P5 1572 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 E9PCH4 1651 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 UNC119BA6NIH7 251 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 DUX1O43812 170 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 MT-ND5P03915 603 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 AMY2AP04746 511 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 PYCR1P32322 319 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ZP2Q05996 745 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 CRYZQ08257 329 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 EIPR1Q53HC9 387 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 MFSD5Q6N075 450 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 DVL3Q92997 716 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 MMP17Q9ULZ9 603 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 PLAGL2Q9UPG8 496 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 WDR81Q562E7 1941 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 NKX6-3A6NJ46 265 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 DVL2O14641 736 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 RRP8O43159 456 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 PPIHO43447 177 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 PRNPP04156 253 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 DRD5P21918 477 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 TACR3P29371 465 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 CCR8P51685 355 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 LASP1Q14847 261 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 FAM109BQ6ICB4 259 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 DCP2Q8IU60 420 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ACBD7Q8N6N7 88 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 M1APQ8TC57 530 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM230Q96A57 120 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SLC22A4Q9H015 551 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM140Q9NV12 185 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 GALPQ9UBC7 116 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 IGHV3-43A0A0B4J1X8 118 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SIRPB1O00241 398 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 IGHV3-43DP0DP04 118 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SLC15A1P46059 708 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ACTG1P63261 375 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 HSD11B2P80365 405 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 FAM69AQ5T7M9 428 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 GDPD4Q6W3E5 623 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 THOC6Q86W42 341 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 CBR4Q8N4T8 237 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 OR2T34Q8NGX1 318 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 OR2T3Q8NH03 318 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 OR4K13Q8NH42 304 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ULBP3Q9BZM4 244 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 A0A0B4J203 849 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 OR6C65A6NJZ3 312 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SULT1C2O00338 296 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 TGDSO95455 350 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ITGB2P05107 769 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 MMP2P08253 660 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SCGB1C2P0DMR2 95 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF3P17036 446 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 AGTR1P30556 359 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 KIR3DL1P43629 444 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms