RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 CLDN24A6NM45 220 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 KLRC4-KLRK1H3BQV0 150 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 hCG_2039718K7EN88 272 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 GNGT2O14610 69 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 KRT36O76013 467 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 NUDT14O95848 222 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 EPPINO95925 133 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 CST1P01037 141 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 CNR1P21554 472 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 PTGDSP41222 190 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 OR1E2P47887 323 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 TNFSF10P50591 281 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 SPIBQ01892 262 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 ST3GAL3Q11203 375 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 ATP6AP1Q15904 470 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 INAQ16352 499 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 COL28A1Q2UY09 1125 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 WBP2NLQ6ICG8 309 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 OR2T5Q6IEZ7 315 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 SLC25A25Q6KCM7 469 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 PLCZ1Q86YW0 608 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 PQLC1Q8N2U9 271 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 LSMEM1Q8N8F7 131 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 OR10Q1Q8NGQ4 319 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 OR1J4Q8NGS1 313 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 OR2T29Q8NH02 315 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 ZNF563Q8TA94 476 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 ST8SIA1Q92185 356 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 SLCO4A1Q96BD0 722 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 SDCCAG3Q96C92 435 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 SCMH1Q96GD3 660 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 AMBRA1Q9C0C7 1298 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 REEP1Q9H902 201 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 C12orf10Q9HB07 376 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 GALNT9Q9HCQ5 603 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 AGPAT4Q9NRZ5 378 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 NDUFAF4Q9P032 175 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 STX18Q9P2W9 335 aaKnown RBP13.24□□□□□ -0.29
SHMT2-210ENST00000553950 ICAM5Q9UMF0 924 aa13.24□□□□□ -0.29
SHMT2-210ENST00000553950 TRAPPC13A5PLN9 417 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 H3BNX3 289 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 ACOT7O00154 380 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 CDC40O60508 579 aaKnown RBP eCLIP13.23□□□□□ -0.29
SHMT2-210ENST00000553950 SP1P08047 785 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 TNFRSF1BP20333 461 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 HTR3AP46098 478 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 ARHGDIAP52565 204 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 ZNF136P52737 540 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 TBR1Q16650 682 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 ZNF766Q5HY98 468 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 COLEC12Q5KU26 742 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 ENTPD8Q5MY95 495 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 DESI1Q6ICB0 168 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 MDGA2Q7Z553 956 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 FADS6Q8N9I5 356 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 DUSP19Q8WTR2 217 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 PHF10Q8WUB8 498 aaKnown RBP13.23□□□□□ -0.29
SHMT2-210ENST00000553950 DNAJA4Q8WW22 397 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-210ENST00000553950 NTNG2Q96CW9 530 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 SH3YL1Q96HL8 342 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-210ENST00000553950 SIGLEC12Q96PQ1 595 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 ARHGAP9Q9BRR9 750 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 FNDC11Q9BVV2 318 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 KRCC1Q9NPI7 259 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-210ENST00000553950 ACAD8Q9UKU7 415 aa13.23□□□□□ -0.29
SHMT2-210ENST00000553950 H0Y3Z8 333 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 CLOCKO15516 846 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 FRS3O43559 492 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 CHP2O43745 196 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 TRIM3O75382 744 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-210ENST00000553950 E2F6O75461 281 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 TIPRLO75663 272 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 CBR3O75828 277 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 GADD45GO95257 159 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 H1F0P07305 194 aaKnown RBP13.22□□□□□ -0.29
SHMT2-210ENST00000553950 GKN3PP0CG01 181 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 PNMTP11086 282 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 ANPEPP15144 967 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 EIF1P41567 113 aaKnown RBP13.22□□□□□ -0.29
SHMT2-210ENST00000553950 PLAURQ03405 335 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 TRAM2Q15035 370 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 NPTX1Q15818 432 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 BICRALQ6AI39 1079 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 TIGD3Q6B0B8 471 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 SPINK14Q6IE38 97 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 ULK3Q6PHR2 472 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 COMTD1Q86VU5 262 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 ZNF227Q86WZ6 799 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 LACC1Q8IV20 430 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 SVOPLQ8N434 492 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 LINC00471Q8N535 108 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 OR2M7Q8NG81 312 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 OR2M3Q8NG83 312 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 ADAMTS16Q8TE57 1224 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 ZBTB8AQ96BR9 441 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 CENPNQ96H22 339 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-210ENST00000553950 MPP4Q96JB8 637 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 DHRS1Q96LJ7 313 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 EPYCQ99645 322 aa13.22□□□□□ -0.29
SHMT2-210ENST00000553950 OSBPL10Q9BXB5 764 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms