RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 AMDHD1Q96NU7 426 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 YIPF4Q9BSR8 244 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 REG4Q9BYZ8 158 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 OR51I1Q9H343 314 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 KCNK12Q9HB15 430 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 NIT2Q9NQR4 276 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 PRDM7Q9NQW5 492 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 PTTG3PQ9NZH4 202 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 CLEC1BQ9P126 229 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 PHF11Q9UIL8 331 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 ADAM29Q9UKF5 820 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 ATG4BQ9Y4P1 393 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 F5P12259 2224 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 TICRRQ7Z2Z1 1910 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 TRBV23-1A0A0A0MS06 115 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 A0A1W2PR48 441 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 NME6O75414 186 aaPredicted RBP8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 CCNB2O95067 398 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 EGFP01133 1207 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 IGFBP1P08833 259 aaPredicted RBP8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 ADRA2AP08913 450 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 C8orf89P0DMQ9 161 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 AK4P27144 223 aaPredicted RBP8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 NTSR1P30989 418 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 CRYBB2P43320 205 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 RAB13P51153 203 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 PPP3R1P63098 170 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 PTGES3Q15185 160 aaKnown RBP8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 TMEM31Q5JXX7 168 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 ATAT1Q5SQI0 421 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 C18orf63Q68DL7 685 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 PYHIN1Q6K0P9 492 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 TCTN3Q6NUS6 607 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 TMEM184AQ6ZMB5 413 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 RAB42Q8N4Z0 105 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 DENND6BQ8NEG7 585 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 CCL4L1Q8NHW4 92 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 C2CD4CQ8TF44 421 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 TCEAL3Q969E4 200 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 FAM131CQ96AQ9 280 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 KCTD7Q96MP8 289 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 FCRL4Q96PJ5 515 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 CDCA3Q99618 268 aaPredicted RBP8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 TMEM43Q9BTV4 400 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 LMAN2LQ9H0V9 348 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 PLEKHB1Q9UF11 243 aaPredicted RBP8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 TBC1D29Q9UFV1 150 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 KCND3Q9UK17 655 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 ASB4Q9Y574 426 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 TP53BP1Q12888 1972 aaPredicted RBP8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 TRBV23OR9-2A0A075B6M9 112 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 TEX13CA0A0J9YWL9 993 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 MAN2B1O00754 1011 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 SLC28A2O43868 658 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 ERAL1O75616 437 aaKnown RBP8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 IL1AP01583 271 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 CERS1P27544 350 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 TNFRSF4P43489 277 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 NCBP2P52298 156 aaKnown RBP eCLIP8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 AGFG1P52594 562 aaKnown RBP8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 RAB8AP61006 207 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 TFF2Q03403 129 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 LGALS3BPQ08380 585 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 IKZF1Q13422 519 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 GPR176Q14439 515 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 PAQR7Q86WK9 346 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 ACOT4Q8N9L9 421 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 SUN3Q8TAQ9 357 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 XAGE5Q8WWM1 108 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 CNRIP1Q96F85 164 aaPredicted RBP8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 GABRG3Q99928 467 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 TREX2Q9BQ50 279 aaPredicted RBP8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 CDCA4Q9BXL8 241 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 ACSS1Q9NUB1 689 aaPredicted RBP8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 TXNL4BQ9NX01 149 aaKnown RBP8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 APOBEC3BQ9UH17 382 aaKnown RBP8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 CEP290O15078 2479 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 HYKKA2RU49 373 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 TO15178 435 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 KLF8O95600 359 aaPredicted RBP8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 ADRB1P08588 477 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 SDHBP21912 280 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 KCNJ5P48544 419 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 PRKAG1P54619 331 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 CRTC2Q53ET0 693 aaPredicted RBP8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 MLIPQ5VWP3 458 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 ABHD17CQ6PCB6 329 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 TMEM88Q6PEY1 159 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 TMEM107Q6UX40 140 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 DEF8Q6ZN54 512 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 USP30Q70CQ3 517 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 RD3Q7Z3Z2 195 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 CCDC116Q8IYX3 515 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 CLDN22Q8N7P3 220 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 ZNF454Q8N9F8 522 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 SYT14Q8NB59 555 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 OR4E2Q8NGC2 313 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 OR1E3Q8WZA6 343 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 MSLNLQ96KJ4 702 aa8.41□□□□□ -1.06
AL049839.2-201ENST00000553947 PDCD10Q9BUL8 212 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms