RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 DIO2Q92813 273 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 TMBIM1Q969X1 311 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 IMMP1LQ96LU5 166 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 ZNF300Q96RE9 604 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-208ENST00000553868 MDFIQ99750 246 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 QRSL1Q9H0R6 528 aaKnown RBP13.26□□□□□ -0.29
SHMT2-208ENST00000553868 SEMA6AQ9H2E6 1030 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 REEP1Q9H902 201 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 ZBTB20Q9HC78 741 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-208ENST00000553868 UBQLN4Q9NRR5 601 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 DTNAQ9Y4J8 743 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 H3BNH8 94 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 UGT2B17O75795 530 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 IGKV1D-16P01601 117 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 ZNF23P17027 643 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 NAGAP17050 411 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 PEX2P28328 305 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 OR1E2P47887 323 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 PNLIPRP2P54317 469 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 NRF1Q16656 503 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 HIPK1Q86Z02 1210 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 ZDHHC13Q8IUH4 622 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 SLC15A4Q8N697 577 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 PACRGLQ8N7B6 248 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 OR5K1Q8NHB7 308 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 ELP5Q8TE02 316 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 SLC35B4Q969S0 331 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 OMA1Q96E52 524 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 PIP5K1AQ99755 562 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 ARHGDIGQ99819 225 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 OSBPL10Q9BXB5 764 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 FBXO34Q9NWN3 711 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 NDUFAF4Q9P032 175 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 ZNF223Q9UK11 482 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-208ENST00000553868 CNOT11Q9UKZ1 510 aaKnown RBP13.25□□□□□ -0.29
SHMT2-208ENST00000553868 ABCG2Q9UNQ0 655 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 CSAG2Q9Y5P2 127 aa13.25□□□□□ -0.29
SHMT2-208ENST00000553868 A0A1B0GUH1 482 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 SAC3D1A6NKF1 404 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 NPIPB9F8W1W9 429 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 C19orf84I3L1E1 186 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 SCDO00767 359 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 UTS2O95399 124 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 NGFRP08138 427 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 STSP08842 583 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 TNFRSF1BP20333 461 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 SSTR2P30874 369 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 DNAJA1P31689 397 aaKnown RBP13.24□□□□□ -0.29
SHMT2-208ENST00000553868 CLK3P49761 638 aaKnown RBP13.24□□□□□ -0.29
SHMT2-208ENST00000553868 ART1P52961 327 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 RGS8P57771 180 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-208ENST00000553868 EEF1A1P68104 462 aaKnown RBP13.24□□□□□ -0.29
SHMT2-208ENST00000553868 PDZK1Q5T2W1 519 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 LPCAT4Q643R3 524 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 ZNF836Q6ZNA1 936 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 ZBTB49Q6ZSB9 765 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 ZAR1Q86SH2 424 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 MRGPREQ86SM8 312 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 RANBP3LQ86VV4 465 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-208ENST00000553868 ZNF440Q8IYI8 595 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 ZNF614Q8N883 585 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 VANGL1Q8TAA9 524 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-208ENST00000553868 GRHL3Q8TE85 626 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 NRG4Q8WWG1 115 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 EFHD2Q96C19 240 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-208ENST00000553868 ZG16BQ96DA0 208 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 NRBF2Q96F24 287 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 MESP1Q9BRJ9 268 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 AMBRA1Q9C0C7 1298 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 POLR2J2Q9GZM3 115 aaKnown RBP13.24□□□□□ -0.29
SHMT2-208ENST00000553868 POLR2J3Q9H1A7 115 aaKnown RBP13.24□□□□□ -0.29
SHMT2-208ENST00000553868 ZNF160Q9HCG1 818 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 CHST11Q9NPF2 352 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 MYOTQ9UBF9 498 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 SLC35A3Q9Y2D2 325 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 SAMHD1Q9Y3Z3 626 aaKnown RBP13.24□□□□□ -0.29
SHMT2-208ENST00000553868 NPFFR2Q9Y5X5 522 aa13.24□□□□□ -0.29
SHMT2-208ENST00000553868 PRRC2AP48634 2157 aaKnown RBP13.24□□□□□ -0.29
SHMT2-208ENST00000553868 NPIPA5A0A0B4J1W7 369 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 CDHR4A6H8M9 788 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 OR6C70A6NIJ9 312 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 NPIPA7E9PJI5 369 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 G3V2T6 193 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 M0R3H8 397 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 AP3D1O14617 1153 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 TSPAN2O60636 221 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 PPM1BO75688 479 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 NPIPA8P0DM63 369 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 FPR1P21462 350 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 TBXA2RP21731 343 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 ABCD3P28288 659 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 SPIBQ01892 262 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 ATP1A4Q13733 1029 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 FGFBP1Q14512 234 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 MAPK14Q16539 360 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 LRRC36Q1X8D7 754 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 IQCCQ4KMZ1 466 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 MRPL2Q5T653 305 aaKnown RBP13.23□□□□□ -0.29
SHMT2-208ENST00000553868 DEF8Q6ZN54 512 aa13.23□□□□□ -0.29
SHMT2-208ENST00000553868 ZNF550Q7Z398 422 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms