RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 KCMF1Q9P0J7 381 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 ACAD8Q9UKU7 415 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 A4GNTQ9UNA3 340 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 KCNMB2Q9Y691 235 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 KCNE3Q9Y6H6 103 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 A0A1W2PQU0 124 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 MFSD2BA6NFX1 497 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 K7EQS6 105 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 FAAHO00519 579 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 GATCO43716 136 aaKnown RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 NCR1O76036 304 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 EML2O95834 649 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 TGM6O95932 706 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 CHRM4P08173 479 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 C8orf89P0DMQ9 161 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 C5AR1P21730 350 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 RAB40BQ12829 278 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 UAP1L1Q3KQV9 507 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 Q3ZCU0 254 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 SYT14P1Q58G82 188 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 C18orf63Q68DL7 685 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 PGBD2Q6P3X8 592 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 CHMP1BQ7LBR1 199 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 OR2L8Q8NGY9 312 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 OR2T4Q8NH00 348 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 ZNF764Q96H86 408 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 SLC35G5Q96KT7 338 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 ZNF354BQ96LW1 612 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 ZNF582Q96NG8 517 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 REG4Q9BYZ8 158 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 PHPT1Q9NRX4 125 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 ZCCHC3Q9NUD5 404 aaKnown RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 MRPS18AQ9NVS2 196 aaKnown RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 MED9Q9NWA0 146 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 SLC17A4Q9Y2C5 497 aa11.41□□□□□ -0.58
SHMT2-207ENST00000553837 EXOSC1Q9Y3B2 195 aaKnown RBP11.41□□□□□ -0.58
SHMT2-207ENST00000553837 MYO10Q9HD67 2058 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 GPR171O14626 319 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 ERI3O43414 337 aaKnown RBP11.4□□□□□ -0.58
SHMT2-207ENST00000553837 ADH1BP00325 375 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 APODP05090 189 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 GDI1P31150 447 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 KIR2DL1P43626 348 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-207ENST00000553837 NCBP2P52298 156 aaKnown RBP eCLIP11.4□□□□□ -0.58
SHMT2-207ENST00000553837 PRKAG1P54619 331 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 MLC1Q15049 377 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 LTB4RQ15722 352 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 CCDC36Q8IYA8 594 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 TBC1D19Q8N5T2 526 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 NEIL3Q8TAT5 605 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 CNRIP1Q96F85 164 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-207ENST00000553837 C16orf58Q96GQ5 468 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 LRR1Q96L50 414 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 GPA33Q99795 319 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 SEC22CQ9BRL7 303 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 ARHGAP9Q9BRR9 750 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 TIMM29Q9BSF4 260 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 SLC19A3Q9BZV2 496 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 MRPS30Q9NP92 439 aaKnown RBP11.4□□□□□ -0.58
SHMT2-207ENST00000553837 DLL4Q9NR61 685 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 ENAMQ9NRM1 1142 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 SEMA3GQ9NS98 782 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 COPZ2Q9P299 210 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 TRPC4Q9UBN4 977 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 SEC14L3Q9UDX4 400 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 BAIAP2Q9UQB8 552 aa11.4□□□□□ -0.58
SHMT2-207ENST00000553837 MDC1Q14676 2089 aaKnown RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 GPR89AB7ZAQ6 455 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 ABCD4O14678 606 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 LRRTM2O43300 516 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 LANCL1O43813 399 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 ERAL1O75616 437 aaKnown RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 SNAPC5O75971 98 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 TCRBP04435 133 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 H1F0P07305 194 aaKnown RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 GPR89BP0CG08 455 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 SULT1A3P0DMM9 295 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 SULT1A4P0DMN0 295 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 ACP2P11117 423 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 CERS1P27544 350 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 RFX3P48380 749 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 RPL6Q02878 288 aaKnown RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 ZNF169Q14929 603 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 MRM1Q6IN84 353 aaKnown RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 ABHD17CQ6PCB6 329 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 RRM2BQ7LG56 351 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 OVCH2Q7RTZ1 564 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 LRRC28Q86X40 367 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 MEX3DQ86XN8 651 aaKnown RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 MARCH9Q86YJ5 346 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 CCDC116Q8IYX3 515 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 PIAS4Q8N2W9 510 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-207ENST00000553837 IQCF1Q8N6M8 205 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 ACOT4Q8N9L9 421 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 UXS1Q8NBZ7 420 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 OR2L3Q8NG85 312 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 OR14C36Q8NHC7 312 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 ADAMTS14Q8WXS8 1223 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 WBP1Q96G27 269 aa11.4□□□□□ -0.59
SHMT2-207ENST00000553837 DPYSL5Q9BPU6 564 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms