RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 RAB1BQ9H0U4 201 aa12.06□□□□□ -0.48
PRPF39-204ENST00000553605 HIF1ANQ9NWT6 349 aa12.06□□□□□ -0.48
PRPF39-204ENST00000553605 NMRK1Q9NWW6 199 aa12.06□□□□□ -0.48
PRPF39-204ENST00000553605 MOKQ9UQ07 419 aa12.06□□□□□ -0.48
PRPF39-204ENST00000553605 PGRMC1O00264 195 aaKnown RBP12.05□□□□□ -0.48
PRPF39-204ENST00000553605 UPK1AO00322 258 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 CYTIPO60759 359 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 PDYNP01213 254 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 PGCP20142 388 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 EPHA1P21709 976 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 CRABP2P29373 138 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 IDH3GP51553 393 aaPredicted RBP12.05□□□□□ -0.48
PRPF39-204ENST00000553605 SLC29A2Q14542 456 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 GABRA6Q16445 453 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 GLE1Q53GS7 698 aaKnown RBP12.05□□□□□ -0.48
PRPF39-204ENST00000553605 TMEM107Q6UX40 140 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 WDR31Q8NA23 367 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 B4GALNT2Q8NHY0 566 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 SELENOMQ8WWX9 145 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 PIK3R3Q92569 461 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 TMEM186Q96B77 213 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 ANKZF1Q9H8Y5 726 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 BRF2Q9HAW0 419 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 ASB6Q9NWX5 421 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 TAS2R16Q9NYV7 291 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 DMGDHQ9UI17 866 aaKnown RBP12.05□□□□□ -0.48
PRPF39-204ENST00000553605 MCM8Q9UJA3 840 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 GRIP1Q9Y3R0 1128 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 PCDHB14Q9Y5E9 798 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 NBEAL2Q6ZNJ1 2754 aa12.05□□□□□ -0.48
PRPF39-204ENST00000553605 GOLGA6L10A0A0M3HER8 536 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 A0A1W2PNR3 127 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 B9A039 149 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 SLITRK5O94991 958 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 PSMG1O95456 288 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 JUNP05412 331 aaKnown RBP12.04□□□□□ -0.48
PRPF39-204ENST00000553605 NGFRP08138 427 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 ARAFP10398 606 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 SPRP35270 261 aaPredicted RBP12.04□□□□□ -0.48
PRPF39-204ENST00000553605 PRIM2P49643 509 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 NCBP2P52298 156 aaKnown RBP eCLIP12.04□□□□□ -0.485e-8■■■□□ 16
PRPF39-204ENST00000553605 TRAF3Q13114 568 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 HEPACAMQ14CZ8 416 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 SPATA19Q7Z5L4 167 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 MISPQ8IVT2 679 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 ZNF786Q8N393 782 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 NUP43Q8NFH3 380 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 FBXO27Q8NI29 283 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 FBF1Q8TES7 1133 aa12.04□□□□□ -0.48
PRPF39-204ENST00000553605 DDX18Q9NVP1 670 aaKnown RBP12.04□□□□□ -0.48
PRPF39-204ENST00000553605 CPSF2Q9P2I0 782 aaKnown RBP12.04□□□□□ -0.48
PRPF39-204ENST00000553605 MYO1GB0I1T2 1018 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 KIF2AO00139 706 aaPredicted RBP12.03□□□□□ -0.48
PRPF39-204ENST00000553605 HKR1P10072 659 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 IFNGR1P15260 489 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 HPGDP15428 266 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 DDX5P17844 614 aaKnown RBP12.03□□□□□ -0.48
PRPF39-204ENST00000553605 SLC7A1P30825 629 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 SSTR1P30872 391 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 PPOXP50336 477 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 RIN1Q13671 783 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 TRADDQ15628 312 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 FAM83EQ2M2I3 478 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 GGTA1PQ4G0N0 100 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 ZBED8Q8IZ13 594 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 CENPLQ8N0S6 344 aaPredicted RBP12.03□□□□□ -0.48
PRPF39-204ENST00000553605 OR2L13Q8N349 312 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 OR4F6Q8NGB9 312 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 GPR151Q8TDV0 419 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 NEU4Q8WWR8 484 aaPredicted RBP12.03□□□□□ -0.48
PRPF39-204ENST00000553605 APH1AQ96BI3 265 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 SUCNR1Q9BXA5 334 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 CDC42EP4Q9H3Q1 356 aaKnown RBP12.03□□□□□ -0.48
PRPF39-204ENST00000553605 VPS29Q9UBQ0 182 aa12.03□□□□□ -0.48
PRPF39-204ENST00000553605 GNG14A0A1W2PPG7 69 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 CCDC189A1A4V9 331 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 TTC36A6NLP5 189 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 E7ESA3 106 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 PCDH7O60245 1069 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 NUDT14O95848 222 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 ERCC1P07992 297 aaPredicted RBP12.02□□□□□ -0.49
PRPF39-204ENST00000553605 FOXG1P55316 489 aaPredicted RBP12.02□□□□□ -0.49
PRPF39-204ENST00000553605 GRTP1Q5TC63 336 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 FAHD2BQ6P2I3 314 aaPredicted RBP12.02□□□□□ -0.49
PRPF39-204ENST00000553605 ZNF662Q6ZS27 426 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 TEX29Q8N6K0 151 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 ZDHHC22Q8N966 263 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 C16orf78Q8WTQ4 265 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 WDR60Q8WVS4 1066 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 ELP4Q96EB1 424 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 FAHD2AQ96GK7 314 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 MRGPRX4Q96LA9 322 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 LRRC37BQ96QE4 947 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 SHCBP1LQ9BZQ2 653 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 PLK3Q9H4B4 646 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 LPAR2Q9HBW0 351 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 ESM1Q9NQ30 184 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 CA10Q9NS85 328 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 SNX6Q9UNH7 406 aa12.02□□□□□ -0.49
PRPF39-204ENST00000553605 WBP11Q9Y2W2 641 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms