RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 DSCR3O14972 297 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 POLR1CO15160 346 aaPredicted RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 TOX3O15405 576 aaPredicted RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 DUX1O43812 170 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 AKAP8O43823 692 aaKnown RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 FOXD2O60548 495 aaPredicted RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 PPM1BO75688 479 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 ADRA2AP08913 450 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 HBQ1P09105 142 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 TSPAN19P0C672 248 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 OCM2P0CE71 109 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 OCMP0CE72 109 aaPredicted RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CFL1P23528 166 aaKnown RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 HOXA6P31267 233 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 FGF9P31371 208 aaPredicted RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 SLC1A3P43003 542 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CRYBB2P43320 205 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 GPR4P46093 362 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 RORCP51449 518 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 GPR143P51810 404 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 AFF3P51826 1226 aaKnown RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 DCAF7P61962 342 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 FOXK2Q01167 660 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 RPL6Q02878 288 aaKnown RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 ITGADQ13349 1161 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 UBXN2BQ14CS0 331 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 EXOSC7Q15024 291 aaKnown RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 ISXQ2M1V0 245 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 TRIM16LQ309B1 348 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 DEFB110Q30KQ9 67 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 ANKDD1AQ495B1 522 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 PLK5Q496M5 336 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 PDZK1Q5T2W1 519 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CCNJQ5T5M9 372 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 ARHGAP11AQ6P4F7 1023 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CD200R1LQ6Q8B3 271 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 SMARCD3Q6STE5 483 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 LINC00114Q6XXX2 140 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 QSOX2Q6ZRP7 698 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CXXC5Q7LFL8 322 aaKnown RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 NUP54Q7Z3B4 507 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 PRSS42Q7Z5A4 293 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 WDR53Q7Z5U6 358 aaPredicted RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 ZNF761Q86XN6 746 aaPredicted RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 PLXDC1Q8IUK5 500 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 PHC2Q8IXK0 858 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 TMEFF1Q8IYR6 380 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 KLHL36Q8N4N3 616 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 ZNF527Q8NB42 609 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 OR4Q3Q8NH05 313 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 DNAJA4Q8WW22 397 aaPredicted RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 RLN3Q8WXF3 142 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 AP3S1Q92572 193 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 BPIFA2Q96DR5 249 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 PEX11GQ96HA9 241 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 ART5Q96L15 291 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 SLC46A1Q96NT5 459 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CHCHD6Q9BRQ6 235 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CENPOQ9BU64 300 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CCDC32Q9BV29 185 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 ALOXE3Q9BYJ1 711 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 DUSP15Q9H1R2 295 aaPredicted RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 OR52D1Q9H346 318 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 UBQLN3Q9H347 655 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 SP140LQ9H930 580 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 C12orf10Q9HB07 376 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CTPS2Q9NRF8 586 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CMC2Q9NRP2 79 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 TMEM74BQ9NUR3 256 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 ASB6Q9NWX5 421 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 SOHLH2Q9NX45 425 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 DNAJB12Q9NXW2 375 aaKnown RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 HAO2Q9NYQ3 351 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 TAS2R16Q9NYV7 291 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 H2AFY2Q9P0M6 372 aaPredicted RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 HCN3Q9P1Z3 774 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CLEC2DQ9UHP7 191 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 KCNE5Q9UJ90 142 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CDV3Q9UKY7 258 aaKnown RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CBLCQ9ULV8 474 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 POLHQ9Y253 713 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 SIGLEC7Q9Y286 467 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 GSTK1Q9Y2Q3 226 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CAB39Q9Y376 341 aaPredicted RBP6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CLDN16Q9Y5I7 305 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CORINQ9Y5Q5 1042 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 GON4LQ3T8J9 2241 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CACNA1EQ15878 2313 aa6.3□□□□□ -1.4
CCDC59-206ENST00000552412 CENPVL1A0A0U1RR11 272 aa6.29□□□□□ -1.4
CCDC59-206ENST00000552412 A0A1B0GWA3 101 aa6.29□□□□□ -1.4
CCDC59-206ENST00000552412 SLC35F4A4IF30 521 aa6.29□□□□□ -1.4
CCDC59-206ENST00000552412 SERINC4A6NH21 518 aa6.29□□□□□ -1.4
CCDC59-206ENST00000552412 H3BMH7 237 aa6.29□□□□□ -1.4
CCDC59-206ENST00000552412 J3QRE1 110 aa6.29□□□□□ -1.4
CCDC59-206ENST00000552412 CDC42EP2O14613 210 aa6.29□□□□□ -1.4
CCDC59-206ENST00000552412 HCRTR1O43613 425 aa6.29□□□□□ -1.4
CCDC59-206ENST00000552412 PTP4A3O75365 173 aa6.29□□□□□ -1.4
CCDC59-206ENST00000552412 GPX5O75715 221 aa6.29□□□□□ -1.4
CCDC59-206ENST00000552412 UPK1BO75841 260 aa6.29□□□□□ -1.4
CCDC59-206ENST00000552412 IFNGP01579 166 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms