RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 TMEM178BH3BS89 294 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 M0R3G1 203 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 HAT1O14929 419 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 MID1O15344 667 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 PRKAB2O43741 272 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 CHST1O43916 411 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 ZIC3O60481 467 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 FCN3O75636 299 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 GPX5O75715 221 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 DIRAS1O95057 198 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 NXPH2O95156 264 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 PLAUP00749 431 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 CT62P0C5K7 136 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 ACP2P11117 423 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 ZNF43P17038 809 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 BCKDHBP21953 392 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 AADACP22760 399 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 TEAD1P28347 426 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 PRDX3P30048 256 aaKnown RBP5.58□□□□□ -1.52
VPS29-210ENST00000552130 EPHX2P34913 555 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 MLF1P58340 268 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 ACTBP60709 375 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 ACTA2P62736 377 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 ACTG1P63261 375 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 ACTG2P63267 376 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 ACTC1P68032 377 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 ACTA1P68133 377 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 REEP5Q00765 189 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 IL9RQ01113 521 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 GHRHRQ02643 423 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 ZP4Q12836 540 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 ITGA9Q13797 1035 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 KLF5Q13887 457 aaPredicted RBP5.58□□□□□ -1.52
VPS29-210ENST00000552130 DUOXA1Q1HG43 343 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 AARS2Q5JTZ9 985 aaKnown RBP5.58□□□□□ -1.52
VPS29-210ENST00000552130 C9orf135Q5VTT2 229 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 STUMQ69YW2 141 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 RHBDF2Q6PJF5 856 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 NIPA1Q7RTP0 329 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 CENPSQ8N2Z9 138 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 KLHDC1Q8N7A1 406 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 LRTM2Q8N967 370 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 ZNF680Q8NEM1 530 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 OR13C5Q8NGS8 318 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 OR5R1Q8NH85 324 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 TEX47Q8TBZ9 253 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 RDH11Q8TC12 318 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 TFAP2BQ92481 460 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 SMARCD2Q92925 531 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 NUS1Q96E22 293 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 GBA3Q9H227 469 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 C1orf198Q9H425 327 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 NMRAL1Q9HBL8 299 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 AKIP1Q9NQ31 210 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 PRSS16Q9NQE7 514 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 STARD5Q9NSY2 213 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 GPR83Q9NYM4 423 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 IL36GQ9NZH8 169 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 WARS2Q9UGM6 360 aaKnown RBP5.58□□□□□ -1.52
VPS29-210ENST00000552130 IKZF3Q9UKT9 509 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 MMP24Q9Y5R2 645 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 TSSC4Q9Y5U2 329 aaPredicted RBP5.58□□□□□ -1.52
VPS29-210ENST00000552130 A0A1W2PRD5 423 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 BCLAF3A2AJT9 711 aaKnown RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 FAM74A7A6NL05 159 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 SRRM4A7MD48 611 aaKnown RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 IMPA2O14732 288 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 CFLARO15519 480 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 B4GALT5O43286 388 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 RAMP3O60896 148 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 PSIP1O75475 530 aaKnown RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 PRKRAO75569 313 aaKnown RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 WISP2O76076 250 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 P04436 131 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 IFNA6P05013 189 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 H1F0P07305 194 aaKnown RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 ANXA5P08758 320 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 NR2C1P13056 603 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 PGCP20142 388 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 EPHA2P29317 976 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 RBMS1P29558 406 aaKnown RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 STX2P32856 288 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 ACVR1BP36896 505 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 CEACAM3P40198 252 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 HSPA2P54652 639 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 RPS4XP62701 263 aaKnown RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 PITX1P78337 314 aaPredicted RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 MRPS25P82663 173 aaKnown RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 PITPNAQ00169 270 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 MFGE8Q08431 387 aaPredicted RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 ST3GAL1Q11201 340 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 SELENBP1Q13228 472 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 GRB7Q14451 532 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 OPCMLQ14982 345 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 ATXN7L3Q14CW9 347 aaPredicted RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 TRAM2Q15035 370 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 CTF1Q16619 201 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 ACCSLQ4AC99 568 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 FAM74A3Q4VXF1 159 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 LY6G6FQ5SQ64 297 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms