RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 NPIPA8P0DM63 369 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 CPA2P48052 419 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 CLNS1AP54105 237 aaKnown RBP13.84□□□□□ -0.19
BRF1-220ENST00000552127 SLC18A1P54219 525 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 RPS3AP61247 264 aaKnown RBP13.84□□□□□ -0.19
BRF1-220ENST00000552127 MAGOHP61326 146 aaKnown RBP13.84□□□□□ -0.19
BRF1-220ENST00000552127 RPS26P62854 115 aaKnown RBP13.84□□□□□ -0.19
BRF1-220ENST00000552127 DPY19L1Q2PZI1 675 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 PLPPR5Q32ZL2 321 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 KRTAP24-1Q3LI83 254 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 BEND6Q5SZJ8 279 aaPredicted RBP13.84□□□□□ -0.19
BRF1-220ENST00000552127 OGFOD2Q6N063 350 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 MTERF4Q7Z6M4 381 aaKnown RBP13.84□□□□□ -0.19
BRF1-220ENST00000552127 LUZP2Q86TE4 346 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 GGNQ86UU5 652 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 GTPBP8Q8N3Z3 284 aaPredicted RBP13.84□□□□□ -0.19
BRF1-220ENST00000552127 METTL25Q8N6Q8 603 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 OR5D16Q8NGK9 328 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 OR4A15Q8NGL6 344 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 B4GALNT2Q8NHY0 566 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 FIG4Q92562 907 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 TLCD1Q96CP7 247 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 DACH2Q96NX9 599 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 RBM24Q9BX46 236 aaKnown RBP13.84□□□□□ -0.19
BRF1-220ENST00000552127 HOXD1Q9GZZ0 328 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 SERHL2Q9H4I8 314 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 MED17Q9NVC6 651 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 GALNT8Q9NY28 637 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 DSCAMO60469 2012 aa13.84□□□□□ -0.19
BRF1-220ENST00000552127 NPIPB9F8W1W9 429 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 SNNO75324 88 aaPredicted RBP13.83□□□□□ -0.2
BRF1-220ENST00000552127 ALDOCP09972 364 aaKnown RBP13.83□□□□□ -0.2
BRF1-220ENST00000552127 OCRLQ01968 901 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 ZNF117Q03924 483 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 RUNX1T1Q06455 604 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 PON3Q15166 354 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 ANXA8L1Q5VT79 327 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 C6orf120Q7Z4R8 191 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 ANKRD46Q86W74 232 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 CLEC4FQ8N1N0 589 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 RAB3IL1Q8TBN0 382 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 PHOSPHO1Q8TCT1 267 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 ZNF845Q96IR2 970 aaPredicted RBP13.83□□□□□ -0.2
BRF1-220ENST00000552127 RNF145Q96MT1 663 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 NPAS1Q99742 590 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 KLHDC3Q9BQ90 382 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 TMBIM4Q9HC24 238 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 AIG1Q9NVV5 245 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 THAP1Q9NVV9 213 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 NKIRAS1Q9NYS0 192 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 STOML1Q9UBI4 398 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 PCDHGB4Q9UN71 923 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 ABCA1O95477 2261 aa13.83□□□□□ -0.2
BRF1-220ENST00000552127 DUXAA6NLW8 204 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 TRPC5OSA6NMA1 111 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 E9PBE3 544 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 H3BNH8 94 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 EIF1AYO14602 144 aaKnown RBP13.82□□□□□ -0.2
BRF1-220ENST00000552127 SCN2BO60939 215 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 AK1P00568 194 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 FCGR2AP12318 317 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 MATN1P21941 496 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 PSMA4P25789 261 aaKnown RBP13.82□□□□□ -0.2
BRF1-220ENST00000552127 RNF144AP50876 292 aaPredicted RBP13.82□□□□□ -0.2
BRF1-220ENST00000552127 ATP12AP54707 1039 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 SUMO3P55854 103 aaPredicted RBP13.82□□□□□ -0.2
BRF1-220ENST00000552127 PHC1P78364 1004 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 KLHL26Q53HC5 615 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 SPANXN4Q5MJ08 99 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.82□□□□□ -0.2
BRF1-220ENST00000552127 ATG16L1Q676U5 607 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 VWA1Q6PCB0 445 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 WDR75Q8IWA0 830 aaKnown RBP13.82□□□□□ -0.2
BRF1-220ENST00000552127 CNEP1R1Q8N9A8 125 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 MAPK1IP1LQ8NDC0 245 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 VPS37AQ8NEZ2 397 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 FNDC9Q8TBE3 224 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 SDF2Q99470 211 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 GSX2Q9BZM3 304 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 RNF122Q9H9V4 155 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 MARCOQ9UEW3 520 aaPredicted RBP13.82□□□□□ -0.2
BRF1-220ENST00000552127 MEGF8Q7Z7M0 2845 aa13.82□□□□□ -0.2
BRF1-220ENST00000552127 PRSS51A0A1B0GVH4 220 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 SH3D21A4FU49 640 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 MSTNO14793 375 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 HDAC3O15379 428 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 OIP5O43482 229 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 SMNDC1O75940 238 aaKnown RBP eCLIP13.81□□□□□ -0.2
BRF1-220ENST00000552127 CPSF4O95639 269 aaKnown RBP13.81□□□□□ -0.2
BRF1-220ENST00000552127 LINGO3P0C6S8 592 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 FPR1P21462 350 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 UQCRC2P22695 453 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 S100A3P33764 101 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 CPOXP36551 454 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 EIF1AXP47813 144 aaKnown RBP13.81□□□□□ -0.2
BRF1-220ENST00000552127 PTH2RP49190 550 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 SIRPAP78324 504 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 FOXF1Q12946 379 aa13.81□□□□□ -0.2
BRF1-220ENST00000552127 CAPRIN1Q14444 709 aaKnown RBP13.81□□□□□ -0.2
BRF1-220ENST00000552127 FGFBP1Q14512 234 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms