RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 SHC1P29353 583 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 SLC7A1P30825 629 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 KRT6CP48668 564 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 SPOCK1Q08629 439 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 ACSM2AQ08AH3 577 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 ACSM2BQ68CK6 577 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 KLHL7Q8IXQ5 586 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 UBE2J2Q8N2K1 259 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 OR6Y1Q8NGX8 325 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 ZFP90Q8TF47 636 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 FBXO17Q96EF6 278 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 SH3YL1Q96HL8 342 aaPredicted RBP13.42□□□□□ -0.26
CACNB3-220ENST00000551716 MUS81Q96NY9 551 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 GPR78Q96P69 363 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 RBM4Q9BWF3 364 aaKnown RBP13.42□□□□□ -0.26
CACNB3-220ENST00000551716 TRIM31Q9BZY9 425 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 BPESC1Q9GZL8 116 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 ING1Q9UK53 422 aaPredicted RBP13.42□□□□□ -0.26
CACNB3-220ENST00000551716 SNX12Q9UMY4 172 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 PPP2R2CQ9Y2T4 447 aa13.42□□□□□ -0.26
CACNB3-220ENST00000551716 A0A096LPK6 155 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 A0A1W2PQD3 144 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 GXYLT2A0PJZ3 443 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 CYTIPO60759 359 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 RAD51DO75771 328 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 HSPA4LO95757 839 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 IGKV1D-16P01601 117 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 TACSTD2P09758 323 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 GIFP27352 417 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 NTSP30990 170 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 DVL1P1P54792 670 aaPredicted RBP13.41□□□□□ -0.26
CACNB3-220ENST00000551716 PDCD2Q16342 344 aaPredicted RBP13.41□□□□□ -0.26
CACNB3-220ENST00000551716 MST1LQ2TV78 715 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 GALNT18Q6P9A2 607 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 GATSQ8NAP1 163 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 NSUN5Q96P11 429 aaKnown RBP13.41□□□□□ -0.26
CACNB3-220ENST00000551716 SORCS2Q96PQ0 1159 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 JMJD8Q96S16 334 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 VRK1Q99986 396 aaPredicted RBP13.41□□□□□ -0.26
CACNB3-220ENST00000551716 IQCGQ9H095 443 aaKnown RBP13.41□□□□□ -0.26
CACNB3-220ENST00000551716 METTL17Q9H7H0 456 aaPredicted RBP13.41□□□□□ -0.26
CACNB3-220ENST00000551716 MIEF1Q9NQG6 463 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 ASB6Q9NWX5 421 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 TAS2R16Q9NYV7 291 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 EMC3Q9P0I2 261 aa13.41□□□□□ -0.26
CACNB3-220ENST00000551716 WBP11Q9Y2W2 641 aaKnown RBP13.41□□□□□ -0.26
CACNB3-220ENST00000551716 PKD1L1Q8TDX9 2849 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 NPIPA5A0A0B4J1W7 369 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 LRP5LA4QPB2 252 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 NPIPA7E9PJI5 369 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 EFNA2O43921 213 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 ULK1O75385 1050 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 NPIPA8P0DM63 369 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 PRPS2P11908 318 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 APEX1P27695 318 aaKnown RBP13.4□□□□□ -0.26
CACNB3-220ENST00000551716 STX2P32856 288 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 LIMS1P48059 325 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 SERPINB4P48594 390 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 RAE1P78406 368 aaKnown RBP13.4□□□□□ -0.26
CACNB3-220ENST00000551716 DEFA6Q01524 100 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 LGALS3BPQ08380 585 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 FOXF1Q12946 379 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 MLC1Q15049 377 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 ZSWIM7Q19AV6 140 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 LETMD1Q6P1Q0 360 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 USP43Q70EL4 1123 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 SLC46A3Q7Z3Q1 461 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 MTERF4Q7Z6M4 381 aaKnown RBP13.4□□□□□ -0.26
CACNB3-220ENST00000551716 TOR1AIP2Q8NFQ8 470 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 CEP70Q8NHQ1 597 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 FBXO27Q8NI29 283 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 PIK3R3Q92569 461 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 ZNF75CPQ92670 426 aaPredicted RBP13.4□□□□□ -0.26
CACNB3-220ENST00000551716 SOX7Q9BT81 388 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 RAB1BQ9H0U4 201 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 PCDHB14Q9Y5E9 798 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 ACTL7BQ9Y614 415 aa13.4□□□□□ -0.26
CACNB3-220ENST00000551716 IGHV3-15A0A0B4J1V0 119 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 C9JVG2 144 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 MANBAO00462 879 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 NKX2-2O95096 273 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 NUDT14O95848 222 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 ERCC1P07992 297 aaPredicted RBP13.39□□□□□ -0.27
CACNB3-220ENST00000551716 ANXA4P09525 319 aaPredicted RBP13.39□□□□□ -0.27
CACNB3-220ENST00000551716 TYK2P29597 1187 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 TIA1P31483 386 aaKnown RBP eCLIP13.39□□□□□ -0.27
CACNB3-220ENST00000551716 SERPINF1P36955 418 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 PRIM2P49643 509 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 CDH15P55291 814 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 SUMO3P55854 103 aaPredicted RBP13.39□□□□□ -0.27
CACNB3-220ENST00000551716 C2orf80Q0P641 193 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 CALCOCO2Q13137 446 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 PDK3Q15120 406 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 TECRLQ5HYJ1 363 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 MROH9Q5TGP6 573 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 TEX29Q8N6K0 151 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 CDRT4Q8N9R6 151 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 ATP6V1C2Q8NEY4 427 aa13.39□□□□□ -0.27
CACNB3-220ENST00000551716 HOXB13Q92826 284 aaPredicted RBP13.39□□□□□ -0.27
CACNB3-220ENST00000551716 APH1AQ96BI3 265 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms