RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 CXCR3P49682 368 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SULT1E1P49888 294 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 HCCSP53701 268 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 EPHB3P54753 998 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 DLX5P56178 289 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 NRG3P56975 720 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 HNRNPKP61978 463 aaKnown RBP eCLIP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 FKBP1AP62942 108 aaKnown RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 GABREP78334 506 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 PRR5P85299 388 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 PLIN5Q00G26 463 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 BDH1Q02338 343 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SREBF2Q12772 1141 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 FOXO1Q12778 655 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 RAB40BQ12829 278 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 ILF3Q12906 894 aaKnown RBP eCLIP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 PDZK1IP1Q13113 114 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SRSF5Q13243 272 aaKnown RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 EIF4EBP2Q13542 120 aaPredicted RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 C1DQ13901 141 aaKnown RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 KIR3DS1Q14943 382 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 PEA15Q15121 130 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 DHCR24Q15392 516 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 INPP5JQ15735 1006 aaPredicted RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SSX2Q16385 188 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 MST1LQ2TV78 715 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 CRY2Q49AN0 593 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 XKR6Q5GH73 641 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 PYY3Q5JQD4 70 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SLC35D3Q5M8T2 416 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 ATAT1Q5SQI0 421 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 ARMC12Q5T9G4 340 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 PRAMEF18Q5VWM3 479 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 TPGS2Q68CL5 300 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SWSAP1Q6NVH7 229 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 DOK6Q6PKX4 331 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 PAQR3Q6TCH7 311 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 ASB18Q6ZVZ8 466 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 USP30Q70CQ3 517 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 OR2W3Q7Z3T1 314 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 LNX2Q8N448 690 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 NKAPQ8N5F7 415 aaKnown RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 EID2Q8N6I1 236 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 GPRC5AQ8NFJ5 357 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 BEST4Q8NFU0 473 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 OR4K2Q8NGD2 314 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 OR10K1Q8NGX5 313 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 HUS1BQ8NHY5 278 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 RNASE11Q8TAA1 199 aaKnown RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 C2CD4CQ8TF44 421 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SMIM4Q8WVI0 70 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 THAP4Q8WY91 577 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SLC25A28Q96A46 364 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SLC22A18Q96BI1 424 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF707Q96C28 371 aaPredicted RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 IMP4Q96G21 291 aaKnown RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 HPDLQ96IR7 371 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 ZBED3Q96IU2 234 aaPredicted RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 LURAP1Q96LR2 239 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 OR4K3Q96R72 315 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 JMJD8Q96S16 334 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 PFDN5Q99471 154 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 ELF4Q99607 663 aaPredicted RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 VRK1Q99986 396 aaPredicted RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF559Q9BR84 538 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 FAIM2Q9BWQ8 316 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 GPR61Q9BZJ8 451 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 HDHD2Q9H0R4 259 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 METTL9Q9H1A3 318 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 TLNRD1Q9H1K6 362 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 C20orf85Q9H1P6 137 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SLC25A51Q9H1U9 297 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 CDT1Q9H211 546 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 MTG2Q9H4K7 406 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 ELAC1Q9H777 363 aaKnown RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 WDR26Q9H7D7 661 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SFXN1Q9H9B4 322 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 CERS4Q9HA82 394 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 LRTM1Q9HBL6 345 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 PXMP2Q9NR77 195 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SMCO4Q9NRQ5 59 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 PIGVQ9NUD9 493 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 OR6C2Q9NZP2 312 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 KLHL42Q9P2K6 505 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 EIF2B4Q9UI10 523 aaKnown RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 CA14Q9ULX7 337 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 TNFSF13BQ9Y275 285 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 EXOSC1Q9Y3B2 195 aaKnown RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 SPIN1Q9Y657 262 aaPredicted RBP4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 ENPP4Q9Y6X5 453 aa4.92□□□□□ -1.62
LSM3P2-201ENST00000551246 KCNE1BA0A087WTH5 132 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 CCDC187A0A096LP49 1063 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 TRAV14DV4A0A0A6YYC5 116 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 A0A0D9SG52 128 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ABHD14A-ACY1A0A1B0GW23 586 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 A0A1W2PQ45 241 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 A0A1W2PQY0 241 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 A0A1W2PRQ8 180 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 KLRG2A4D1S0 409 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 POM121BA6NF01 834 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms