RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 POLR2J3Q9H1A7 115 aaKnown RBP2.61□□□□□ -1.99
GPN3-209ENST00000551079 STRAPQ9Y3F4 350 aaKnown RBP2.61□□□□□ -1.99
GPN3-209ENST00000551079 LRP4O75096 1905 aa2.61□□□□□ -1.99
GPN3-209ENST00000551079 DDX39AO00148 427 aaKnown RBP2.6□□□□□ -1.99
GPN3-209ENST00000551079 KERAO60938 352 aa2.6□□□□□ -1.99
GPN3-209ENST00000551079 MED6O75586 246 aa2.6□□□□□ -1.99
GPN3-209ENST00000551079 UFL1O94874 794 aa2.6□□□□□ -1.99
GPN3-209ENST00000551079 PCCAP05165 728 aaPredicted RBP2.6□□□□□ -1.99
GPN3-209ENST00000551079 ANXA4P09525 319 aaPredicted RBP2.6□□□□□ -1.99
GPN3-209ENST00000551079 HLA-DPA1P20036 260 aa2.6□□□□□ -1.99
GPN3-209ENST00000551079 CBX3Q13185 183 aa2.6□□□□□ -1.99
GPN3-209ENST00000551079 RABGAP1LQ5R372 815 aa2.6□□□□□ -1.99
GPN3-209ENST00000551079 LPCAT2Q7L5N7 544 aa2.6□□□□□ -1.99
GPN3-209ENST00000551079 VRK2Q86Y07 508 aa2.6□□□□□ -1.99
GPN3-209ENST00000551079 URGCPQ8TCY9 931 aa2.6□□□□□ -1.99
GPN3-209ENST00000551079 PIGCQ92535 297 aa2.6□□□□□ -1.99
GPN3-209ENST00000551079 MCHR1Q99705 422 aa2.6□□□□□ -1.99
GPN3-209ENST00000551079 UTP6Q9NYH9 597 aaKnown RBP2.6□□□□□ -1.99
GPN3-209ENST00000551079 ARHGAP42A6NI28 874 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 SLC9B1P1A6NJY1 282 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 HCN1O60741 890 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 PDHBP11177 359 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 ADRB3P13945 408 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 UQCRBP14927 111 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 COX7A1P24310 79 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 PRDX6P30041 224 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 NMT1P30419 496 aaKnown RBP2.59□□□□□ -1.99
GPN3-209ENST00000551079 CSNK1G2P78368 415 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 MAP2K1Q02750 393 aaPredicted RBP2.59□□□□□ -1.99
GPN3-209ENST00000551079 NEK5Q6P3R8 708 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 LYPD1Q8N2G4 141 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 OR51G1Q8NGK1 321 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 CITED1Q99966 193 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 ACAT2Q9BWD1 397 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 ATG10Q9H0Y0 220 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 LPAR2Q9HBW0 351 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 IL20RAQ9UHF4 553 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 CYTH4Q9UIA0 394 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 PHF11Q9UIL8 331 aa2.59□□□□□ -1.99
GPN3-209ENST00000551079 CCDC7Q96M83 1385 aa2.59□□□□□ -2
GPN3-209ENST00000551079 SLIT3O75094 1523 aa2.58□□□□□ -2
GPN3-209ENST00000551079 OR6C65A6NJZ3 312 aa2.58□□□□□ -2
GPN3-209ENST00000551079 LGALS8O00214 317 aa2.58□□□□□ -2
GPN3-209ENST00000551079 PES1O00541 588 aaKnown RBP2.58□□□□□ -2
GPN3-209ENST00000551079 HBQ1P09105 142 aa2.58□□□□□ -2
GPN3-209ENST00000551079 ANXA3P12429 323 aa2.58□□□□□ -2
GPN3-209ENST00000551079 AKT2P31751 481 aa2.58□□□□□ -2
GPN3-209ENST00000551079 LONP1P36776 959 aaKnown RBP2.58□□□□□ -2
GPN3-209ENST00000551079 GGTLC2Q14390 218 aa2.58□□□□□ -2
GPN3-209ENST00000551079 TMEM52BQ4KMG9 183 aa2.58□□□□□ -2
GPN3-209ENST00000551079 SLC10A5Q5PT55 438 aa2.58□□□□□ -2
GPN3-209ENST00000551079 ATF7IP2Q5U623 682 aa2.58□□□□□ -2
GPN3-209ENST00000551079 TMEM26Q6ZUK4 368 aa2.58□□□□□ -2
GPN3-209ENST00000551079 MIER3Q7Z3K6 550 aa2.58□□□□□ -2
GPN3-209ENST00000551079 SNX32Q86XE0 403 aa2.58□□□□□ -2
GPN3-209ENST00000551079 NRMQ8IXM6 262 aa2.58□□□□□ -2
GPN3-209ENST00000551079 DQX1Q8TE96 717 aaKnown RBP2.58□□□□□ -2
GPN3-209ENST00000551079 RSPO3Q9BXY4 272 aaPredicted RBP2.58□□□□□ -2
GPN3-209ENST00000551079 TMEM231Q9H6L2 316 aa2.58□□□□□ -2
GPN3-209ENST00000551079 ZNF282Q9UDV7 671 aaPredicted RBP2.58□□□□□ -2
GPN3-209ENST00000551079 NUFIP1Q9UHK0 495 aaKnown RBP2.58□□□□□ -2
GPN3-209ENST00000551079 UGT2A1Q9Y4X1 527 aa2.58□□□□□ -2
GPN3-209ENST00000551079 NEUROG3Q9Y4Z2 214 aa2.58□□□□□ -2
GPN3-209ENST00000551079 RPGRIP1LQ68CZ1 1315 aa2.58□□□□□ -2
GPN3-209ENST00000551079 TTC21BQ7Z4L5 1316 aa2.58□□□□□ -2
GPN3-209ENST00000551079 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.57□□□□□ -2
GPN3-209ENST00000551079 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.57□□□□□ -2
GPN3-209ENST00000551079 RNF222A6NCQ9 220 aa2.57□□□□□ -2
GPN3-209ENST00000551079 HELTA6NFD8 242 aa2.57□□□□□ -2
GPN3-209ENST00000551079 WASH3PC4AMC7 463 aa2.57□□□□□ -2
GPN3-209ENST00000551079 RIPK2O43353 540 aa2.57□□□□□ -2
GPN3-209ENST00000551079 ZNF780AO75290 641 aaPredicted RBP2.57□□□□□ -2
GPN3-209ENST00000551079 SLC25A27O95847 323 aa2.57□□□□□ -2
GPN3-209ENST00000551079 AHCYP23526 432 aa2.57□□□□□ -2
GPN3-209ENST00000551079 OAS2P29728 719 aaKnown RBP2.57□□□□□ -2
GPN3-209ENST00000551079 PLK1P53350 603 aa2.57□□□□□ -2
GPN3-209ENST00000551079 PRPS1P60891 318 aa2.57□□□□□ -2
GPN3-209ENST00000551079 NTHL1P78549 312 aa2.57□□□□□ -2
GPN3-209ENST00000551079 RGS1Q08116 209 aa2.57□□□□□ -2
GPN3-209ENST00000551079 FUT7Q11130 342 aa2.57□□□□□ -2
GPN3-209ENST00000551079 EXOSC2Q13868 293 aaKnown RBP2.57□□□□□ -2
GPN3-209ENST00000551079 PDIA5Q14554 519 aa2.57□□□□□ -2
GPN3-209ENST00000551079 NDUFA9Q16795 377 aa2.57□□□□□ -2
GPN3-209ENST00000551079 LIPNQ5VXI9 398 aa2.57□□□□□ -2
GPN3-209ENST00000551079 WASH2PQ6VEQ5 465 aa2.57□□□□□ -2
GPN3-209ENST00000551079 WDR88Q6ZMY6 472 aa2.57□□□□□ -2
GPN3-209ENST00000551079 CERS5Q8N5B7 392 aa2.57□□□□□ -2
GPN3-209ENST00000551079 ZNF713Q8N859 430 aaPredicted RBP2.57□□□□□ -2
GPN3-209ENST00000551079 FAM151AQ8WW52 585 aa2.57□□□□□ -2
GPN3-209ENST00000551079 RNF185Q96GF1 192 aa2.57□□□□□ -2
GPN3-209ENST00000551079 MS4A14Q96JA4 679 aa2.57□□□□□ -2
GPN3-209ENST00000551079 OR5B2Q96R09 309 aa2.57□□□□□ -2
GPN3-209ENST00000551079 CYP2S1Q96SQ9 504 aa2.57□□□□□ -2
GPN3-209ENST00000551079 NRIP2Q9BQI9 281 aa2.57□□□□□ -2
GPN3-209ENST00000551079 SLC30A2Q9BRI3 323 aa2.57□□□□□ -2
GPN3-209ENST00000551079 SLC25A22Q9H936 323 aa2.57□□□□□ -2
GPN3-209ENST00000551079 CNOT2Q9NZN8 540 aaKnown RBP2.57□□□□□ -2
GPN3-209ENST00000551079 STOX2Q9P2F5 926 aaPredicted RBP2.57□□□□□ -2
GPN3-209ENST00000551079 ERVW-1Q9UQF0 538 aa2.57□□□□□ -2
GPN3-209ENST00000551079 IGHV3-64DA0A0J9YX35 117 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms