RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 UBLCP1Q8WVY7 318 aaPredicted RBP20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 CDS1Q92903 461 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 PPP3R2Q96LZ3 170 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 RHOXF2Q9BQY4 288 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 ACTRT3Q9BYD9 372 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 TXLNGYQ9BZA5 131 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 KLHL9Q9P2J3 617 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 ACTL7BQ9Y614 415 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 LSM1O15116 133 aaKnown RBP20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 KRT4P19013 534 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 CCT3P49368 545 aaKnown RBP20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 ZNF117Q03924 483 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 ITGADQ13349 1161 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 CD226Q15762 336 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 SPDYE7PQ495Y7 208 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 BHLHB9Q6PI77 547 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 C10orf107Q8IVU9 208 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 GABRG1Q8N1C3 465 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 BANPQ8N9N5 519 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 ATP6V1C2Q8NEY4 427 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 OR2T11Q8NH01 316 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 SMAP2Q8WU79 429 aaPredicted RBP20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 ALG2Q9H553 416 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 ATP6V1HQ9UI12 483 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 DNAJC15Q9Y5T4 150 aa20.54■□□□□ 0.88
SMARCD1-209ENST00000550477 A0A1W2PP18 115 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 GCM2O75603 506 aaPredicted RBP20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 LYPLA1O75608 230 aaPredicted RBP20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 ADAP00813 363 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 BCKDHAP12694 445 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 ATP12AP54707 1039 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 DMTNQ08495 405 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 SELENBP1Q13228 472 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 KLHL26Q53HC5 615 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 KANK2Q63ZY3 851 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 TDRPQ86YL5 185 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 ZNF614Q8N883 585 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 TOR1AIP2Q8NFQ8 470 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 SPATA3Q8NHX4 192 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 RAB3IL1Q8TBN0 382 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 ZFP90Q8TF47 636 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 OR5P2Q8WZ92 322 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 MOAP1Q96BY2 351 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 MUCL1Q96DR8 90 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 OTUB1Q96FW1 271 aaPredicted RBP20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 MRGPRX4Q96LA9 322 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 MDFIQ99750 246 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 POTEKPQ9BYX7 375 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 FAIMQ9NVQ4 179 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 CARD8Q9Y2G2 431 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 RTTNQ86VV8 2226 aa20.53■□□□□ 0.88
SMARCD1-209ENST00000550477 PRR14LQ5THK1 2151 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 SMIM23A6NLE4 172 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 SCAMP2O15127 329 aaKnown RBP20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 CRLF1O75462 422 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 FGF4P08620 206 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 RAC3P60763 192 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 TAB1Q15750 504 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 DCST2Q5T1A1 773 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 HEPHL1Q6MZM0 1159 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 NUFIP2Q7Z417 695 aaKnown RBP20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 TWIST2Q8WVJ9 160 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 GATA5Q9BWX5 397 aaPredicted RBP20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 SRXN1Q9BYN0 137 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 TUBB1Q9H4B7 451 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 ICAM5Q9UMF0 924 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 DTNAQ9Y4J8 743 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 TRAF6Q9Y4K3 522 aa20.52■□□□□ 0.88
SMARCD1-209ENST00000550477 EIF4E2O60573 245 aaKnown RBP20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 EFNA1P20827 205 aaPredicted RBP20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 ZNF844Q08AG5 666 aa20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 CBFBQ13951 182 aa20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 ZNF672Q499Z4 452 aaPredicted RBP20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 ATP6AP1LQ52LC2 224 aa20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 EXOSC6Q5RKV6 272 aaKnown RBP20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 BHLHA15Q7RTS1 189 aaPredicted RBP20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 TMCO5AQ8N6Q1 288 aa20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 EIF1ADQ8N9N8 165 aaKnown RBP20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 GPR119Q8TDV5 335 aa20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 BARX1Q9HBU1 254 aaPredicted RBP20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 SERINC1Q9NRX5 453 aa20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 SIRT3Q9NTG7 399 aaPredicted RBP20.51■□□□□ 0.87
SMARCD1-209ENST00000550477 RNF223E7ERA6 249 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 OVOL3O00110 214 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 CFLARO15519 480 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 NPHS1O60500 1241 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 TSC22D1Q15714 1073 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 CBLN3Q6UW01 205 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 Q6ZT83 130 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 CXXC5Q7LFL8 322 aaKnown RBP20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 C4orf33Q8N1A6 199 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 OR7A2PQ8NGA2 310 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 RFWD2Q8NHY2 731 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 PIWIL2Q8TC59 973 aaKnown RBP20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 HS6ST2Q96MM7 605 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 REG4Q9BYZ8 158 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 C12orf65Q9H3J6 166 aaKnown RBP20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 LIPT1Q9Y234 373 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 FREM1Q5H8C1 2179 aa20.5■□□□□ 0.87
SMARCD1-209ENST00000550477 NUP214P35658 2090 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms