RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 UBLCP1Q8WVY7 318 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-218ENST00000548945 ROBO4Q8WZ75 1007 aa11.44□□□□□ -0.58
PTCH1-218ENST00000548945 TSSK3Q96PN8 268 aa11.44□□□□□ -0.58
PTCH1-218ENST00000548945 PPCSQ9HAB8 311 aa11.44□□□□□ -0.58
PTCH1-218ENST00000548945 FBXO34Q9NWN3 711 aa11.44□□□□□ -0.58
PTCH1-218ENST00000548945 GPC6Q9Y625 555 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-218ENST00000548945 ANK3Q12955 4377 aaKnown RBP11.44□□□□□ -0.58
PTCH1-218ENST00000548945 H3BNH8 94 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 ZNF195O14628 629 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 LSM1O15116 133 aaKnown RBP11.43□□□□□ -0.58
PTCH1-218ENST00000548945 AKAP10O43572 662 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 PRKD3O94806 890 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 CHEK2O96017 543 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 HMGN2P05204 90 aaKnown RBP11.43□□□□□ -0.58
PTCH1-218ENST00000548945 FESP07332 822 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 YES1P07947 543 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 THBS1P07996 1170 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 SFTPDP35247 375 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 RPL3P39023 403 aaKnown RBP11.43□□□□□ -0.58
PTCH1-218ENST00000548945 P2RX1P51575 399 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 ZNF117Q03924 483 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 DMTNQ08495 405 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 FOXF1Q12946 379 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 TAB1Q15750 504 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 RFTN2Q52LD8 501 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-218ENST00000548945 KLHL26Q53HC5 615 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 CCNJQ5T5M9 372 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 FCRLAQ7L513 359 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 TUSC5Q8IXB3 177 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 OR2T11Q8NH01 316 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 PIWIL2Q8TC59 973 aaKnown RBP11.43□□□□□ -0.58
PTCH1-218ENST00000548945 PHOSPHO1Q8TCT1 267 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 SMAP2Q8WU79 429 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-218ENST00000548945 JADE3Q92613 823 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 KISS1RQ969F8 398 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-218ENST00000548945 FAM120BQ96EK7 910 aaKnown RBP11.43□□□□□ -0.58
PTCH1-218ENST00000548945 C16orf58Q96GQ5 468 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 KLHDC3Q9BQ90 382 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 SRXN1Q9BYN0 137 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 POTEKPQ9BYX7 375 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 GRIP2Q9C0E4 1043 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 PIGUQ9H490 435 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 HEATR1Q9H583 2144 aaKnown RBP11.43□□□□□ -0.58
PTCH1-218ENST00000548945 SIRT3Q9NTG7 399 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-218ENST00000548945 ZCCHC3Q9NUD5 404 aaKnown RBP11.43□□□□□ -0.58
PTCH1-218ENST00000548945 ATP6V1HQ9UI12 483 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 MID2Q9UJV3 735 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 ICAM5Q9UMF0 924 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 PTGDR2Q9Y5Y4 395 aa11.43□□□□□ -0.58
PTCH1-218ENST00000548945 ETV2O00321 342 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-218ENST00000548945 EFNA2O43921 213 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 SASH3O75995 380 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 NTN1O95631 604 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 SOD3P08294 240 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 KRT16P08779 473 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 BCKDHAP12694 445 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 ATP6V1C1P21283 382 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 SHC1P29353 583 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 HPCAL1P37235 193 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 RAC3P60763 192 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 RPL38P63173 70 aaKnown RBP11.42□□□□□ -0.58
PTCH1-218ENST00000548945 ITGADQ13349 1161 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 VEZF1Q14119 521 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 TMEM176BQ3YBM2 270 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-218ENST00000548945 ZNF672Q499Z4 452 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-218ENST00000548945 SLC25A53Q5H9E4 307 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 CDC73Q6P1J9 531 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 Q6ZT83 130 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 NUFIP2Q7Z417 695 aaKnown RBP11.42□□□□□ -0.58
PTCH1-218ENST00000548945 NATD1Q8N6N6 113 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 CCDC63Q8NA47 563 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 CLHC1Q8NHS4 586 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 FBXO27Q8NI29 283 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 PSMA8Q8TAA3 256 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 ZFP90Q8TF47 636 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 CDS1Q92903 461 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 GTPBP3Q969Y2 492 aaKnown RBP11.42□□□□□ -0.58
PTCH1-218ENST00000548945 MRGPRX4Q96LA9 322 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 ACTRT3Q9BYD9 372 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 REG4Q9BYZ8 158 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 TUBB1Q9H4B7 451 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 COQ10BQ9H8M1 238 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 BCO1Q9HAY6 547 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 KLHL9Q9P2J3 617 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 BAIAP2L1Q9UHR4 511 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 DNAJC15Q9Y5T4 150 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 CUBNO60494 3623 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 NBEAL1Q6ZS30 2694 aa11.42□□□□□ -0.58
PTCH1-218ENST00000548945 YLPM1P49750 1951 aaKnown RBP11.41□□□□□ -0.58
PTCH1-218ENST00000548945 A0A1W2PP18 115 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 TMEM114B3SHH9 223 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 COPEO14579 308 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 SCAMP2O15127 329 aaKnown RBP11.41□□□□□ -0.58
PTCH1-218ENST00000548945 CLOCKO15516 846 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 TLX2O43763 284 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-218ENST00000548945 NUDT14O95848 222 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 ADAP00813 363 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 FGF4P08620 206 aa11.41□□□□□ -0.58
PTCH1-218ENST00000548945 NUDT17P0C025 328 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms