RNA–Protein interactions for RNA: ENST00000548858.1

AC025260.1-201, humanhuman

BASIC

Gene AC025260.1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025260.1-201ENST00000548858 RANBP1P43487 201 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 GNPDA1P46926 289 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 EFNB2P52799 333 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 OTUD4Q01804 1114 aaKnown RBP3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 IFFO1Q0D2I5 559 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 PLD1Q13393 1074 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 C1orf61Q13536 156 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 SIX1Q15475 284 aaPredicted RBP3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 VWA2Q5GFL6 755 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 FAM182AQ5T1J6 154 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 ARMC12Q5T9G4 340 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 LGSNQ5TDP6 509 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 REP15Q6BDI9 236 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 OR8G2PQ6IF36 304 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 VITQ6UXI7 678 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 ERICH1Q86X53 443 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 RNF130Q86XS8 419 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 KLHDC8BQ8IXV7 354 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 CEP112Q8N8E3 955 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 PRSS33Q8NF86 280 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 BRSK1Q8TDC3 778 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 SCFD1Q8WVM8 642 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 CRYGNQ8WXF5 182 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 LRRC45Q96CN5 670 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 RAB3CQ96E17 227 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 PRICKLE1Q96MT3 831 aaPredicted RBP3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 RBM14Q96PK6 669 aaKnown RBP3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 CCNL2Q96S94 520 aaPredicted RBP3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 ATF6BQ99941 703 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 CHRDL1Q9BU40 450 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 UPF3BQ9BZI7 483 aaKnown RBP3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 ROPN1BQ9BZX4 212 aaPredicted RBP3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 TRIM4Q9C037 500 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 ZNF696Q9H7X3 374 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 RCOR3Q9P2K3 495 aaPredicted RBP3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 ZNF639Q9UID6 485 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 TMCO1Q9UM00 188 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 OARD1Q9Y530 152 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 N6AMT1Q9Y5N5 214 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 CPQQ9Y646 472 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 TTC21BQ7Z4L5 1316 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 KIF15Q9NS87 1388 aa3.89□□□□□ -1.79
AC025260.1-201ENST00000548858 SOGA1O94964 1423 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 GAPVD1Q14C86 1478 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 TEX48A0A1B0GUV7 120 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 LRP5LA4QPB2 252 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 G3V4G9 280 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 MGRN1O60291 552 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 SHOX2O60902 331 aaPredicted RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 WBP4O75554 376 aaKnown RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 ZNF189O75820 626 aaPredicted RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 LRATO95237 230 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 DUS4LO95620 317 aaKnown RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 CA1P00915 261 aaPredicted RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 AGTP01019 485 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 CCDC166P0CW27 439 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 TROVE2P10155 538 aaKnown RBP eCLIP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 PVRP15151 417 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 ACADSP16219 412 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 IMPDH1P20839 514 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 LMO2P25791 158 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 CCR1P32246 355 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 CCT6AP40227 531 aaKnown RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 EPS15P42566 896 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 ARHGDIAP52565 204 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 PRRX1P54821 245 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 RND3P61587 244 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 RPL8P62917 257 aaKnown RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 RAB40BQ12829 278 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 SRSF5Q13243 272 aaKnown RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 LY6DQ14210 128 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 NECTIN1Q15223 517 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 RCN1Q15293 331 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 CYP51A1Q16850 503 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 TMEM52BQ4KMG9 183 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 C6orf226Q5I0X4 101 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 CCDC122Q5T0U0 273 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 PVRIGQ6DKI7 326 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 CCBE1Q6UXH8 406 aaPredicted RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 LRRTM1Q86UE6 522 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 PAQR7Q86WK9 346 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 ECHDC2Q86YB7 292 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 TGIF2LXQ8IUE1 241 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 PHC2Q8IXK0 858 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 CLEC4FQ8N1N0 589 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 LINC01561Q8N1V8 128 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 SUMF1Q8NBK3 374 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 HCAR2Q8TDS4 363 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 GTF3AQ92664 365 aaKnown RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 C9orf85Q96MD7 179 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 COPS8Q99627 209 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 NIPSNAP3BQ9BS92 247 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 NXF5Q9H1B4 397 aaKnown RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 UPF3AQ9H1J1 476 aaKnown RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 VCX3BQ9H321 246 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 AMBNQ9NP70 447 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 MEPEQ9NQ76 525 aaPredicted RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 EXOSC3Q9NQT5 275 aaKnown RBP3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 SLC17A5Q9NRA2 495 aa3.88□□□□□ -1.79
AC025260.1-201ENST00000548858 FAM120CQ9NX05 1096 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms