RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 TRMT10CQ7L0Y3 403 aaKnown RBP7.54□□□□□ -1.2
TROAP-208ENST00000548817 ZNF551Q7Z340 670 aaPredicted RBP7.54□□□□□ -1.2
TROAP-208ENST00000548817 TRABD2AQ86V40 505 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 HOMEZQ8IX15 550 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 LILRA2Q8N149 483 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 ARIH2OSQ8N7S6 290 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 COX18Q8N8Q8 333 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 CCDC63Q8NA47 563 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 ZNF527Q8NB42 609 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 SMAP2Q8WU79 429 aaPredicted RBP7.54□□□□□ -1.2
TROAP-208ENST00000548817 JADE3Q92613 823 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 KISS1RQ969F8 398 aaPredicted RBP7.54□□□□□ -1.2
TROAP-208ENST00000548817 S100PBPQ96BU1 408 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 PPCDCQ96CD2 204 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 C11orf24Q96F05 449 aaPredicted RBP7.54□□□□□ -1.2
TROAP-208ENST00000548817 KLHL15Q96M94 604 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 ZNF696Q9H7X3 374 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 VIPAS39Q9H9C1 493 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 MED17Q9NVC6 651 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 FAIMQ9NVQ4 179 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 FBXO34Q9NWN3 711 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 SH3BP4Q9P0V3 963 aa7.54□□□□□ -1.2
TROAP-208ENST00000548817 PRR14LQ5THK1 2151 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 VWFP04275 2813 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 TRRAPQ9Y4A5 3859 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 FAM234BA2RU67 622 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 GTPBP1O00178 669 aaKnown RBP7.53□□□□□ -1.2
TROAP-208ENST00000548817 AKAP10O43572 662 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 KCNK2O95069 426 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 CHEK2O96017 543 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 IGKV1D-16P01601 117 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 YES1P07947 543 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 SOD3P08294 240 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 ABHD2P08910 425 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 IGHV4-31P0DP07 118 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 UROSP10746 265 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 ITGA2P17301 1181 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 CDKN1AP38936 164 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 CCT5P48643 541 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 POU6F2P78424 691 aaPredicted RBP7.53□□□□□ -1.2
TROAP-208ENST00000548817 FAPQ12884 760 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 P2RY6Q15077 328 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 PRSS53Q2L4Q9 553 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 PLPPR5Q32ZL2 321 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 NCMAPQ5T1S8 102 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 SFRP5Q5T4F7 317 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 MFSD12Q6NUT3 480 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 ZCCHC12Q6PEW1 402 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 SSX8Q7RTT4 187 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 TRIM46Q7Z4K8 759 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 R3HCC1LQ7Z5L2 792 aaKnown RBP7.53□□□□□ -1.2
TROAP-208ENST00000548817 SLC43A2Q8N370 569 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 ATP6V1C2Q8NEY4 427 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 OR4C3Q8NH37 302 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 FBXO30Q8TB52 745 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.53□□□□□ -1.2
TROAP-208ENST00000548817 RAB3IL1Q8TBN0 382 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 PHOSPHO1Q8TCT1 267 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 CPNE4Q96A23 557 aaPredicted RBP7.53□□□□□ -1.2
TROAP-208ENST00000548817 MUCL1Q96DR8 90 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 ADGRG7Q96K78 797 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 MS4A4EQ96PG1 132 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 HOXD1Q9GZZ0 328 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 C12orf65Q9H3J6 166 aaKnown RBP7.53□□□□□ -1.2
TROAP-208ENST00000548817 GSTO2Q9H4Y5 243 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 REEP4Q9H6H4 257 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 GP6Q9HCN6 339 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 MED4Q9NPJ6 270 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 C1orf109Q9NX04 203 aa7.53□□□□□ -1.2
TROAP-208ENST00000548817 PSMC3IPQ9P2W1 217 aaPredicted RBP7.53□□□□□ -1.2
TROAP-208ENST00000548817 MAGED1Q9Y5V3 778 aaPredicted RBP7.53□□□□□ -1.2
TROAP-208ENST00000548817 KMT2CQ8NEZ4 4911 aaKnown RBP7.52□□□□□ -1.21
TROAP-208ENST00000548817 A0A1W2PQD3 144 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 ZNF195O14628 629 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 GLRA3O75311 464 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 ADAP00813 363 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 KRT16P08779 473 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 ELK4P28324 431 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 ADH6P28332 368 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 SLC7A1P30825 629 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 ASMTP46597 345 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 NUDT6P53370 316 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 FOXA1P55317 472 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 ITGADQ13349 1161 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 TAB1Q15750 504 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 STK11Q15831 433 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 ZNF239Q16600 458 aaKnown RBP7.52□□□□□ -1.21
TROAP-208ENST00000548817 TMEM176BQ3YBM2 270 aaPredicted RBP7.52□□□□□ -1.21
TROAP-208ENST00000548817 CCDC153Q494R4 210 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 ZNF672Q499Z4 452 aaPredicted RBP7.52□□□□□ -1.21
TROAP-208ENST00000548817 ANKRD26P1Q6NSI1 321 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 LRIG3Q6UXM1 1119 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 ZYG11AQ6WRX3 759 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 FRMD7Q6ZUT3 714 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 FCRLAQ7L513 359 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 BHLHA15Q7RTS1 189 aaPredicted RBP7.52□□□□□ -1.21
TROAP-208ENST00000548817 TUSC5Q8IXB3 177 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 ZNF619Q8N2I2 560 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 LRRC17Q8N6Y2 441 aa7.52□□□□□ -1.21
TROAP-208ENST00000548817 BANPQ8N9N5 519 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms