RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 NKAIN4Q8IVV8 208 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 NRMQ8IXM6 262 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 SPARTQ8N0X7 666 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 STX19Q8N4C7 294 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 FAM26EQ8N5C1 309 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 PHOSPHO1Q8TCT1 267 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 TTC9Q92623 222 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 RORBQ92753 470 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 ATOH1Q92858 354 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-215ENST00000547672 TCEAL3Q969E4 200 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 RFKQ969G6 155 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 LIN37Q96GY3 246 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-215ENST00000547672 DEPDC7Q96QD5 511 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 TBL1XR1Q9BZK7 514 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 B3GNT4Q9C0J1 378 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 SMOC1Q9H4F8 434 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 SDHAF3Q9NRP4 125 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 PSORS1C1Q9UIG5 152 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 PADI1Q9ULC6 663 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 SEC16AO15027 2179 aa12.37□□□□□ -0.43
PTCH1-215ENST00000547672 LOC102723996A0A087X1L8 192 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 A0A1B0GWA3 101 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 ALG1L2C9J202 215 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 CDX4O14627 284 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-215ENST00000547672 NDUFB5O43674 189 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 TSPAN2O60636 221 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 WBP4O75554 376 aaKnown RBP12.36□□□□□ -0.43
PTCH1-215ENST00000547672 TIAF1O95411 115 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 RAB40ALP0C0E4 278 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 JMJD7P0C870 316 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 PIPP12273 146 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-215ENST00000547672 ICAM2P13598 275 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 PRG2P13727 222 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 PGCP20142 388 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 FMO3P31513 532 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 SLC9A3P48764 834 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 PCYT1AP49585 367 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 SLC26A5P58743 744 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 HOXC5Q00444 222 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 NNATQ16517 81 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 CSRP2Q16527 193 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 ANKDD1AQ495B1 522 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 KLHL22Q53GT1 634 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 FAAH2Q6GMR7 532 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 ISLR2Q6UXK2 745 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 RAB11FIP2Q7L804 512 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 C9orf40Q8IXQ3 194 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 DND1Q8IYX4 353 aaKnown RBP12.36□□□□□ -0.43
PTCH1-215ENST00000547672 ZNF441Q8N8Z8 693 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 FAM71CQ8NEG0 241 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 NFAM1Q8NET5 270 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-215ENST00000547672 OR2T33Q8NG76 320 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 SLC22A8Q8TCC7 542 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 BRIX1Q8TDN6 353 aaKnown RBP12.36□□□□□ -0.43
PTCH1-215ENST00000547672 TMEM255BQ8WV15 326 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 EFHD2Q96C19 240 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-215ENST00000547672 BPIFA2Q96DR5 249 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 OMA1Q96E52 524 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 ADOQ96SZ5 270 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 SPSB2Q99619 263 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 COPS4Q9BT78 406 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 EDEM2Q9BV94 578 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 PRR14Q9BWN1 585 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 RACGAP1Q9H0H5 632 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 APMAPQ9HDC9 416 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 TBC1D23Q9NUY8 699 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 ZNF226Q9NYT6 803 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 H2AFY2Q9P0M6 372 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-215ENST00000547672 NPFFR2Q9Y5X5 522 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 CDH10Q9Y6N8 788 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 COMMD3-BMI1R4GMX3 469 aa12.36□□□□□ -0.43
PTCH1-215ENST00000547672 CENPVL1A0A0U1RR11 272 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 EFCAB9A8MZ26 197 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 KLF4O43474 513 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 CNOT3O75175 753 aaKnown RBP12.35□□□□□ -0.43
PTCH1-215ENST00000547672 TRMUO75648 421 aaKnown RBP12.35□□□□□ -0.43
PTCH1-215ENST00000547672 IFI30P13284 250 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 GABRB1P18505 474 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 HTR2AP28223 471 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 ABCD3P28288 659 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 FOLR3P41439 243 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 ST13P50502 369 aaKnown RBP12.35□□□□□ -0.43
PTCH1-215ENST00000547672 COL9A2Q14055 689 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-215ENST00000547672 NCF4Q15080 339 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 SNAPC1Q16533 368 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 C6orf15Q6UXA7 325 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-215ENST00000547672 LINC00114Q6XXX2 140 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 RTL4Q6ZR62 310 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 LANCL3Q6ZV70 420 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 MRGPREQ86SM8 312 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 CADM2Q8N3J6 435 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 ZNF321PQ8N8H1 164 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 ZSCAN1Q8NBB4 408 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 OR2Y1Q8NGV0 311 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 M1APQ8TC57 530 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 FAM46AQ96IP4 442 aaKnown RBP12.35□□□□□ -0.43
PTCH1-215ENST00000547672 BCL7BQ9BQE9 202 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 PRSS27Q9BQR3 290 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 TSSK6Q9BXA6 273 aa12.35□□□□□ -0.43
PTCH1-215ENST00000547672 DEFB126Q9BYW3 111 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms