RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 FNDC11Q9BVV2 318 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 GALNT9Q9HCQ5 603 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 PLA2G3Q9NZ20 509 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 SELENONQ9NZV5 590 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 RPS6KB2Q9UBS0 482 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 ICAM5Q9UMF0 924 aa14.46□□□□□ -0.09
TRAFD1-203ENST00000547063 TRAPPC13A5PLN9 417 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 ANKUB1A6NFN9 424 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 FAM47E-STBD1D6RA91 191 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 KLRC4-KLRK1H3BQV0 150 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 TAF4O00268 1085 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 FRS3O43559 492 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 OR5F1O95221 314 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 NUDT14O95848 222 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 MT-ND1P03886 318 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 GKN3PP0CG01 181 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 RYKP34925 604 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 ACAA2P42765 397 aaKnown RBP14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 RNF144AP50876 292 aaPredicted RBP14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 ARHGDIAP52565 204 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 TAS2R41P59536 307 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 CXADRP78310 365 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 ST3GAL3Q11203 375 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 NPTX1Q15818 432 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 COL28A1Q2UY09 1125 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 IQCCQ4KMZ1 466 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 ENTPD8Q5MY95 495 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 BICRALQ6AI39 1079 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 WBP2NLQ6ICG8 309 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 SPINK14Q6IE38 97 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 SLC25A25Q6KCM7 469 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 ZNF227Q86WZ6 799 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 PLCZ1Q86YW0 608 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 RBM45Q8IUH3 476 aaKnown RBP14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 MDS2Q8NDY4 140 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 PIK3C3Q8NEB9 887 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 OR4K17Q8NGC6 315 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 OR4D11Q8NGI4 311 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 OR1J4Q8NGS1 313 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 PHF10Q8WUB8 498 aaKnown RBP14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 DNAJA4Q8WW22 397 aaPredicted RBP14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 TMEM234Q8WY98 164 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 LRTOMTQ8WZ04 291 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 NTNG2Q96CW9 530 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 SH3YL1Q96HL8 342 aaPredicted RBP14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 ZNF597Q96LX8 424 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 RTN4RQ9BZR6 473 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 ANKRD19PQ9H560 264 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 REEP1Q9H902 201 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 ACAD8Q9UKU7 415 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 BOKQ9UMX3 212 aaPredicted RBP14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 PCDHGB6Q9Y5F9 930 aa14.45□□□□□ -0.1
TRAFD1-203ENST00000547063 TRAV17A0A0B4J275 112 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 ADAM10O14672 748 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 SNPHO15079 494 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 NME2P1O60361 137 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 BCAS1O75363 584 aaPredicted RBP14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 SP1P08047 785 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 NME2P22392 152 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 ST13P50502 369 aaKnown RBP14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 ZNF41P51814 821 aaPredicted RBP14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 SPIBQ01892 262 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 PLAURQ03405 335 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 SLC34A1Q06495 639 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 OR1Q1Q15612 314 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 TBR1Q16650 682 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 NDUFAF6Q330K2 333 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 COLEC12Q5KU26 742 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 SWT1Q5T5J6 900 aaKnown RBP14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 ULK3Q6PHR2 472 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 CBLN3Q6UW01 205 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 TSEN54Q7Z6J9 526 aaKnown RBP14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 OFCC1Q8IZS5 231 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 ZNF563Q8TA94 476 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 ADAMTS16Q8TE57 1224 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 SIGLEC12Q96PQ1 595 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 PKP2Q99959 881 aa14.44□□□□□ -0.1
TRAFD1-203ENST00000547063 CNTRLQ7Z7A1 2325 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 A0A087WZY1 265 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 A0A1W2PRQ8 180 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 CPSF4LA6NMK7 179 aaKnown RBP14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 TRIM3O75382 744 aaPredicted RBP14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 E2F6O75461 281 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 CBR3O75828 277 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 PRSS23O95084 383 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 GADD45GO95257 159 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 F10P00742 488 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 H1F0P07305 194 aaKnown RBP14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 GP1BBP13224 206 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 PRG2P13727 222 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 RRM2P31350 389 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 HTR3AP46098 478 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 YAP1P46937 504 aaKnown RBP14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 TNFSF10P50591 281 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 HOXC5Q00444 222 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 FOXK2Q01167 660 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 PIN1Q13526 163 aaPredicted RBP14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 DGCR6Q14129 220 aa14.43□□□□□ -0.1
TRAFD1-203ENST00000547063 GANABQ14697 944 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms