RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 SEMA4CQ9C0C4 833 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 GPR52Q9Y2T5 361 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 FBXO7Q9Y3I1 522 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 A0A1W2PPK0 400 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 TCRBV5S1A1TA0A578 114 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 ARRDC5A6NEK1 342 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 TAAR5O14804 337 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 F10P00742 488 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 GBAP04062 536 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 CSF3P09919 207 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 ECI1P42126 302 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 MASP1P48740 699 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 EMP3P54852 163 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 CYP27C1Q4G0S4 372 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 USP51Q70EK9 711 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 CCDC116Q8IYX3 515 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF561Q8N587 486 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 PHOSPHO1Q8TCT1 267 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 RPL10LQ96L21 214 aaKnown RBP12.04□□□□□ -0.48
PTCH1-212ENST00000546744 WDFY2Q96P53 400 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 MS4A4EQ96PG1 132 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 DDX31Q9H8H2 851 aaKnown RBP12.04□□□□□ -0.48
PTCH1-212ENST00000546744 NRIP3Q9NQ35 241 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 NDUFB11Q9NX14 153 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF281Q9Y2X9 895 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 UBE2J1Q9Y385 318 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-212ENST00000546744 CROCCQ5TZA2 2017 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 CIB4A0PJX0 185 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 GABARAPH6UMI1 98 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 SMAD9O15198 467 aaKnown RBP12.04□□□□□ -0.48
PTCH1-212ENST00000546744 DPM1O60762 260 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 MED6O75586 246 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 TBX18O95935 607 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 ZBTB48P10074 688 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-212ENST00000546744 CLUP10909 449 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 POLR2IP36954 125 aaKnown RBP12.04□□□□□ -0.48
PTCH1-212ENST00000546744 PDZK1IP1Q13113 114 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 SEMA3BQ13214 749 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 PIN1Q13526 163 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-212ENST00000546744 COMTD1Q86VU5 262 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 NANOGP1Q8N7R0 232 aa12.04□□□□□ -0.48
PTCH1-212ENST00000546744 MAS1P04201 325 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 OR2T7P0C7T2 308 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 PNMTP11086 282 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 BPIP17213 487 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 CCR7P32248 378 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 PIGAP37287 484 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 PITX1P78337 314 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-212ENST00000546744 CHAF1BQ13112 559 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 GFOD2Q3B7J2 385 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 TMUB2Q71RG4 321 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 CD163Q86VB7 1156 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 OR2T27Q8NH04 317 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 TMEM239Q8WW34 195 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 RAB3CQ96E17 227 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 RRNAD1Q96FB5 475 aaKnown RBP12.03□□□□□ -0.48
PTCH1-212ENST00000546744 LIN37Q96GY3 246 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-212ENST00000546744 C20orf85Q9H1P6 137 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF701Q9NV72 531 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-212ENST00000546744 ADAMTS5Q9UNA0 930 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF195O14628 629 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 AANATQ16613 207 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 GALNT10Q86SR1 603 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 MCEMP1Q8IX19 187 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 CDRT4Q8N9R6 151 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 OR13C3Q8NGS6 347 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 OR10Z1Q8NGY1 313 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 BRI3BPQ8WY22 251 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 TBC1D20Q96BZ9 403 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 HRH4Q9H3N8 390 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 SLC7A11Q9UPY5 501 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 RPH3AQ9Y2J0 694 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-212ENST00000546744 EDDM13A0A1B0GTR0 161 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 H7BY64 318 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 SGK494L7N484 410 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 E2F3O00716 465 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 CDC123O75794 336 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-212ENST00000546744 FCER2P06734 321 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 SMPD1P17405 629 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 MSR1P21757 451 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 CRABP1P29762 137 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 HNF1BP35680 557 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 RPS19P39019 145 aaKnown RBP12.03□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF140P52738 457 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-212ENST00000546744 UBE2KP61086 200 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 SP2Q02086 613 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 ARHGAP19Q14CB8 494 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 XKR7Q5GH72 579 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 SAXO2Q658L1 398 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 OR10K2Q6IF99 312 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 CCDC190Q86UF4 302 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 BPIFB2Q8N4F0 458 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 OR6T1Q8NGN1 323 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 AMBRA1Q9C0C7 1298 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 TCEAL2Q9H3H9 227 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-212ENST00000546744 BACE2Q9Y5Z0 518 aa12.03□□□□□ -0.48
PTCH1-212ENST00000546744 GPR32O75388 356 aa12.02□□□□□ -0.48
PTCH1-212ENST00000546744 CSO75390 466 aaKnown RBP12.02□□□□□ -0.48
PTCH1-212ENST00000546744 SLC16A8O95907 504 aa12.02□□□□□ -0.48
PTCH1-212ENST00000546744 MT-CO2P00403 227 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms