RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 RELAQ04206 551 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 NFATC3Q12968 1075 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 ILKQ13418 452 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 NR0B2Q15466 257 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 CTF1Q16619 201 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 SYT14P1Q58G82 188 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 C1QL3Q5VWW1 255 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 LYPD4Q6UWN0 246 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 C10orf53Q8N6V4 93 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 CLDN22Q8N7P3 220 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 PIGXQ8TBF5 258 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 TEX47Q8TBZ9 253 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 TMEM239Q8WW34 195 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 SLC39A7Q92504 469 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 GALNT9Q9HCQ5 603 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 NPDC1Q9NQX5 325 aaPredicted RBP11.01□□□□□ -0.65
CCDC38-202ENST00000546386 CLN6Q9NWW5 311 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 DNAJB12Q9NXW2 375 aaKnown RBP11.01□□□□□ -0.65
CCDC38-202ENST00000546386 IFT52Q9Y366 437 aa11.01□□□□□ -0.65
CCDC38-202ENST00000546386 C2orf92A0A1B0GVN3 265 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 A0A1B0GX78 115 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 IDSB3KWA1 339 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 NOS3P29474 1203 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 MAP3K8P41279 467 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 ACAA2P42765 397 aaKnown RBP11□□□□□ -0.65
CCDC38-202ENST00000546386 HSD17B7P56937 341 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 ZNF91Q05481 1191 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 IL18R1Q13478 541 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 SF3A2Q15428 464 aaKnown RBP11□□□□□ -0.65
CCDC38-202ENST00000546386 PLBD1Q6P4A8 553 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 TMEM71Q6P5X7 295 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 RANBP3LQ86VV4 465 aaPredicted RBP11□□□□□ -0.65
CCDC38-202ENST00000546386 NLGN4YQ8NFZ3 816 aaPredicted RBP11□□□□□ -0.65
CCDC38-202ENST00000546386 OR9Q1Q8NGQ5 310 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 GATAD2BQ8WXI9 593 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 BPIFA2Q96DR5 249 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 SLC41A2Q96JW4 573 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 DHRS1Q96LJ7 313 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 FOXN4Q96NZ1 517 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 EXOSC4Q9NPD3 245 aaKnown RBP11□□□□□ -0.65
CCDC38-202ENST00000546386 PTTG2Q9NZH5 202 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 ZZEF1O43149 2961 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 H3BSH0 61 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 PSMD9O00233 223 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 DDAH2O95865 285 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 F10P00742 488 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 CDK1P06493 297 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 TDGF1P13385 188 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 DCKP27707 260 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 ATP6V1E1P36543 226 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 PCYT1AP49585 367 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 NUP107P57740 925 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 TSTQ16762 297 aaKnown RBP11□□□□□ -0.65
CCDC38-202ENST00000546386 ARMCX4Q5H9R4 360 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 CPOQ8IVL8 374 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 ACOT11Q8WXI4 607 aaPredicted RBP11□□□□□ -0.65
CCDC38-202ENST00000546386 ZNF285Q96NJ3 590 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 CENPOQ9BU64 300 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 HHATLQ9HCP6 504 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 KLHL1Q9NR64 748 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 TOR4AQ9NXH8 423 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 EPHA6Q9UF33 1036 aa11□□□□□ -0.65
CCDC38-202ENST00000546386 SMG1Q96Q15 3661 aaKnown RBP10.99□□□□□ -0.65
CCDC38-202ENST00000546386 EFCAB7A8K855 629 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 BLOC1S5-TXNDC5H3BN57 136 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 GTPBP1O00178 669 aaKnown RBP10.99□□□□□ -0.65
CCDC38-202ENST00000546386 HCRTR2O43614 444 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 DPM1O60762 260 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 NOL3O60936 208 aaKnown RBP10.99□□□□□ -0.65
CCDC38-202ENST00000546386 CDK4P11802 303 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 ETV5P41161 510 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 ETV1P50549 477 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 RPS7P62081 194 aaKnown RBP10.99□□□□□ -0.65
CCDC38-202ENST00000546386 GPLD1P80108 840 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 RHAGQ02094 409 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 MXD1Q05195 221 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 SLC27A4Q6P1M0 643 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 COX15Q7KZN9 410 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 ZNF721Q8TF20 911 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 Q96MT0 163 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 IFT27Q9BW83 186 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 OR52D1Q9H346 318 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 SIDT1Q9NXL6 827 aaKnown RBP10.99□□□□□ -0.65
CCDC38-202ENST00000546386 NDUFA13Q9P0J0 144 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 TRAPPC13A5PLN9 417 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 H0YIG0 161 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 COQ9O75208 318 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 PPP1R3DO95685 299 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 DBTP11182 482 aaKnown RBP10.99□□□□□ -0.65
CCDC38-202ENST00000546386 RPS18P62269 152 aaKnown RBP10.99□□□□□ -0.65
CCDC38-202ENST00000546386 FUT7Q11130 342 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 NKAIN1Q4KMZ8 207 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 LIPKQ5VXJ0 399 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 PRSS48Q7RTY5 328 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 DEPDC4Q8N2C3 294 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 KDM8Q8N371 416 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 RHBDD1Q8TEB9 315 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 ZNF582Q96NG8 517 aaPredicted RBP10.99□□□□□ -0.65
CCDC38-202ENST00000546386 STACQ99469 402 aa10.99□□□□□ -0.65
CCDC38-202ENST00000546386 YTHDF1Q9BYJ9 559 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 227 ms