RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 OR8J2Q8NGG1 315 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 OR4A15Q8NGL6 344 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 OR5W2Q8NH69 310 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 OR5AK3PQ8NH89 298 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 GPR119Q8TDV5 335 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 OIT3Q8WWZ8 545 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 TESCQ96BS2 214 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 ARSGQ96EG1 525 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 PIK3IP1Q96FE7 263 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 ZC3HAV1LQ96H79 300 aaKnown RBP8.38□□□□□ -1.07
YBX3-218ENST00000546298 SLC35G5Q96KT7 338 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 SDF2Q99470 211 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 PIP5K1AQ99755 562 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 TACO1Q9BSH4 297 aaKnown RBP8.38□□□□□ -1.07
YBX3-218ENST00000546298 OR10A4Q9H209 315 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 GP6Q9HCN6 339 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 POLE3Q9NRF9 147 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 C6orf203Q9P0P8 240 aaPredicted RBP8.38□□□□□ -1.07
YBX3-218ENST00000546298 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.38□□□□□ -1.07
YBX3-218ENST00000546298 HAO1Q9UJM8 370 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 CLEC4AQ9UMR7 237 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 GPR52Q9Y2T5 361 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 KCNE3Q9Y6H6 103 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 V9GYY5 206 aaPredicted RBP8.38□□□□□ -1.07
YBX3-218ENST00000546298 NCKAP5O14513 1909 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 FBN2P35556 2912 aa8.38□□□□□ -1.07
YBX3-218ENST00000546298 PRRC2AP48634 2157 aaKnown RBP8.38□□□□□ -1.07
YBX3-218ENST00000546298 AKAP6Q13023 2319 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 NPIPA5A0A0B4J1W7 369 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 RNF103-CHMP3A0A140T963 221 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 NPIPA7E9PJI5 369 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 ZNF500O60304 480 aaPredicted RBP8.37□□□□□ -1.07
YBX3-218ENST00000546298 SMPD2O60906 423 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 CYP7B1O75881 506 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 PRKD3O94806 890 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 CPSF4O95639 269 aaKnown RBP8.37□□□□□ -1.07
YBX3-218ENST00000546298 GUSBP08236 651 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 NPIPA8P0DM63 369 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 PRKCAP17252 672 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 SLC7A1P30825 629 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 ANXA11P50995 505 aaKnown RBP8.37□□□□□ -1.07
YBX3-218ENST00000546298 CCR4P51679 360 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 NKX6-1P78426 367 aaPredicted RBP8.37□□□□□ -1.07
YBX3-218ENST00000546298 FOXD4Q12950 439 aaPredicted RBP8.37□□□□□ -1.07
YBX3-218ENST00000546298 SELENBP1Q13228 472 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 CBFBQ13951 182 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 GPR68Q15743 365 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 ZNF141Q15928 474 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 ACKR1Q16570 336 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 ZNF239Q16600 458 aaKnown RBP8.37□□□□□ -1.07
YBX3-218ENST00000546298 ARHGAP11BQ3KRB8 267 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 SLC25A53Q5H9E4 307 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.37□□□□□ -1.07
YBX3-218ENST00000546298 HHATQ5VTY9 493 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 ANKRD34AQ69YU3 496 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 C20orf204Q6ZNR8 217 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 EIF3MQ7L2H7 374 aaKnown RBP8.37□□□□□ -1.07
YBX3-218ENST00000546298 ZNF550Q7Z398 422 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 P3H2Q8IVL5 708 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 CLECL1Q8IZS7 167 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 LRRC75A-AS1Q8N1F1 130 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 SLC43A2Q8N370 569 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 TMCO5AQ8N6Q1 288 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 ATP6V1C2Q8NEY4 427 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 STEAP2Q8NFT2 490 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 OR5D16Q8NGK9 328 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 RFWD2Q8NHY2 731 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 MIPOL1Q8TD10 442 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 NUDT8Q8WV74 236 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 TMEM234Q8WY98 164 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 ROBO4Q8WZ75 1007 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 ST8SIA1Q92185 356 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 PPP1R36Q96LQ0 422 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 SORT1Q99523 831 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 NPAS1Q99742 590 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 PAIP2Q9BPZ3 127 aaKnown RBP8.37□□□□□ -1.07
YBX3-218ENST00000546298 USB1Q9BQ65 265 aaKnown RBP8.37□□□□□ -1.07
YBX3-218ENST00000546298 HDHD5Q9BXW7 423 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 LAT2Q9GZY6 243 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 ZNF395Q9H8N7 513 aaPredicted RBP8.37□□□□□ -1.07
YBX3-218ENST00000546298 SERINC1Q9NRX5 453 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 RAB21Q9UL25 225 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 CRYBG3Q68DQ2 2970 aa8.37□□□□□ -1.07
YBX3-218ENST00000546298 FREM3P0C091 2139 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 PDZD2O15018 2839 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 A0A1W2PPR1 153 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 TRPC5OSA6NMA1 111 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 OIP5O43482 229 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 EFNA2O43921 213 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 CSTAP01040 98 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 PGCP20142 388 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 PSMB1P20618 241 aaKnown RBP8.36□□□□□ -1.07
YBX3-218ENST00000546298 BGNP21810 368 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 AGTR1P30556 359 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 HOXC12P31275 282 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 CCKARP32238 428 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 S100A3P33764 101 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 CHI3L1P36222 383 aaPredicted RBP8.36□□□□□ -1.07
YBX3-218ENST00000546298 NR1H2P55055 460 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 RAC3P60763 192 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms