RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 CALHM2Q9HA72 323 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 MCCC2Q9HCC0 563 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 EQTNQ9NQ60 294 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 SDHAF3Q9NRP4 125 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 ATAD3AQ9NVI7 634 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 ASIC5Q9NY37 505 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 ZNF629Q9UEG4 869 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-223ENST00000545440 KCNN3Q9UGI6 736 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 BAIAP2L1Q9UHR4 511 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 ZDHHC2Q9UIJ5 367 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 FREM1Q5H8C1 2179 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 SPG11Q96JI7 2443 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 IGLV3-32A0A0A0MS00 114 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 KDM4EB2RXH2 506 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-223ENST00000545440 H0Y3Z8 333 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 EMC8O43402 210 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 PEX11AO75192 247 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 IL18BPO95998 194 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 CAPN3P20807 821 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 PRPS1L1P21108 318 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 BMP5P22003 454 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 DPP4P27487 766 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 LCN1P31025 176 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 GABRA3P34903 492 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 RFX3P48380 749 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 PRIM2P49643 509 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 CLK3P49761 638 aaKnown RBP6.94□□□□□ -1.3
SNHG1-223ENST00000545440 LHX2P50458 406 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 ZNF136P52737 540 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 DSCR4P56555 118 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-223ENST00000545440 CLDN18P56856 261 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 B3GALT5-AS1P59052 145 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 ABCE1P61221 599 aaKnown RBP6.94□□□□□ -1.3
SNHG1-223ENST00000545440 TLE4Q04727 773 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 CHI3L2Q15782 390 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.94□□□□□ -1.32e-6■■■■■ 41.6
SNHG1-223ENST00000545440 CPTPQ5TA50 214 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 IL23RQ5VWK5 629 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 CES4AQ5XG92 561 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 CAMKMTQ7Z624 323 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 ADGRE4PQ86SQ3 457 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 LURAP1LQ8IV03 231 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 LIX1LQ8IVB5 337 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 LRRC34Q8IZ02 419 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 ZNF781Q8N8C0 355 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 HIPK4Q8NE63 616 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 OR2M3Q8NG83 312 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 OR7A2PQ8NGA2 310 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 OR56A1Q8NGH5 318 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 GPR151Q8TDV0 419 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 PIK3R3Q92569 461 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 TUBGCP3Q96CW5 907 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 FAM120BQ96EK7 910 aaKnown RBP6.94□□□□□ -1.3
SNHG1-223ENST00000545440 LRRC46Q96FV0 321 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 TRIB1Q96RU8 372 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 STACQ99469 402 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 PRPF18Q99633 342 aaKnown RBP6.94□□□□□ -1.3
SNHG1-223ENST00000545440 SH3GL2Q99962 352 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 SFXN3Q9BWM7 321 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 TBL1XR1Q9BZK7 514 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 CENPHQ9H3R5 247 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 PTGES2Q9H7Z7 377 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 EMC7Q9NPA0 242 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 DUSP22Q9NRW4 184 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 SIRT3Q9NTG7 399 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-223ENST00000545440 ZCCHC3Q9NUD5 404 aaKnown RBP6.94□□□□□ -1.3
SNHG1-223ENST00000545440 GIN1Q9NXP7 522 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 FLRT3Q9NZU0 649 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 KLHL14Q9P2G3 628 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 CLCF1Q9UBD9 225 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 GIMAP2Q9UG22 337 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 HAO1Q9UJM8 370 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 EIF3LQ9Y262 564 aaKnown RBP6.94□□□□□ -1.3
SNHG1-223ENST00000545440 RAP2CQ9Y3L5 183 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 L3MBTL1Q9Y468 752 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 F8P00451 2351 aa6.94□□□□□ -1.3
SNHG1-223ENST00000545440 PRRC2AP48634 2157 aaKnown RBP6.93□□□□□ -1.3
SNHG1-223ENST00000545440 RAI1Q7Z5J4 1906 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-223ENST00000545440 A0A1W2PRB8 838 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 GXYLT2A0PJZ3 443 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 CLCA1A8K7I4 914 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 C17orf51A8MQB3 221 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 HCRTR2O43614 444 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 ITM2AO43736 263 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 ZIC3O60481 467 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 SOX30O94993 753 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 KCNK2O95069 426 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 UTS2O95399 124 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 IGKV1D-16P01601 117 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 HMGN2P05204 90 aaKnown RBP6.93□□□□□ -1.3
SNHG1-223ENST00000545440 KRT16P08779 473 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 ALOX5P09917 674 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 ACP2P11117 423 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 LAMP1P11279 417 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 ZNF17P17021 662 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 OPRM1P35372 400 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 RPL14P50914 215 aaKnown RBP6.93□□□□□ -1.3
SNHG1-223ENST00000545440 DIO3P55073 304 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 WNT3P56703 355 aa6.93□□□□□ -1.3
SNHG1-223ENST00000545440 EMX2Q04743 252 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms